Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL148W
Length:
128
Number of sequences:
5887
Description:
YIL148W RPL40A SGDID:S000001410, Chr IX from 68708-68715,69150-69528, Genome Release 64-1-1, Verified ORF, "Fusion protein, identical to Rpl40Bp, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q9HNJ5    47   RL40_HALSA 50S ribosomal protein L40e OS=(Hal...334.6     28.5     52     64GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
332B0R701    47   RL40_HALS3 50S ribosomal protein L40e OS=Halo...334.6     28.5     52     64GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
333P34675    1620   YO25_CAEEL Uncharacterized protein ZK688.5 OS...724.7     30.4     28     50
GO:0007165; P:signal transduction; IEA:InterPro.
334O57686    102   SMO1A_XENLA Small ubiquitin-related modifier ...645.3     29.3     20     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
335P39738    498   FLID_BACSU Flagellar hook-associated protein ...265.9     30     50     69GO:0009288; C:bacterial-type flagellum; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0006928; P:cellular component movement; IEA:InterPro.::GO:0009296; P:flagellum assembly; IEA:InterPro.
336P01693    111   KV12_RABIT Ig kappa chain V region 3368 OS=Or...496.1     29.3     33     55
GO:0003823; F:antigen binding; IEA:UniProtKB-KW.
337Q84WC6    477   UBP7_ARATH Ubiquitin carboxyl-terminal hydrol...576.5     30     23     56
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
338Q8TJ19    49   RL40_METAC 50S ribosomal protein L40e OS=C2A)...357.2     27.7     51     60GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
339Q15370    118   ELOB_HUMAN Transcription elongation factor B ...837.4     29.3     31     48GO:0031462; C:Cul2-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031466; C:Cul5-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006461; P:protein complex assembly; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
340Q00188    241   TRAL4_ECOLX Protein traL OS=Escherichia coli....427.4     29.6     31     57
GO:0000746; P:conjugation; IEA:UniProtKB-KW.
341Q46EN9    49   RL40_METBF 50S ribosomal protein L40e OS=Meth...357.5     27.7     49     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
342Q6Q546    73   HUB1_YEAST Ubiquitin-like modifier HUB1 OS=Sa...697.6     28.1     23     51GO:0005937; C:mating projection; IPI:SGD.
GO:0031386; F:protein tag; IDA:SGD.
GO:0000753; P:cell morphogenesis involved in conjugation with cellular fusion; IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.::GO:0006464; P:protein modification process; IDA:SGD.
343Q7ZYA7    393   DDI2_XENLA Protein DDI1 homolog 2 OS=Xenopus ...587.8     29.6     26     57
GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
records
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