Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL148W
Length:
128
Number of sequences:
5887
Description:
YIL148W RPL40A SGDID:S000001410, Chr IX from 68708-68715,69150-69528, Genome Release 64-1-1, Verified ORF, "Fusion protein, identical to Rpl40Bp, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P33190    129   RL40_TETPY Ubiquitin-60S ribosomal protein L4...1286e-77     230     86     94GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
32P14794    128   RL40_DICDI Ubiquitin-60S ribosomal protein L4...1272e-75     226     87     91GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
33P14795    128   RL40_TRYCR Ubiquitin-60S ribosomal protein L4...1286e-75     225     83     93GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
34P21899    128   RL40_TRYBB Ubiquitin-60S ribosomal protein L4...1283e-74     223     82     93GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
35P69201    128   RL40_LEIMA Ubiquitin-60S ribosomal protein L4...1287e-74     222     83     91GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
36P0CH27    356   RL402_TRYCR Ubiquitin-60S ribosomal protein L...773e-43     150     94     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
37P69200    128   RL40_LEITA Ubiquitin-60S ribosomal protein L4...1287e-72     217     81     90GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
38P19848    76   UBIQ_COPCO Ubiquitin OS=Coprinus congregatus ...767e-48     154     99     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
39P69310    76   UBIQ_AVESA Ubiquitin OS=Avena sativa (Oat). G...762e-47     153     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
40P69326    77   UBIQ_WHEAT Ubiquitin OS=Triticum aestivum (Wh...762e-47     153     97     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
41P69317    77   UBIQ_LUPPO Ubiquitin OS=Lupinus polyphyllus (...772e-47     153     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
42P69313    77   UBIQ_HELAN Ubiquitin OS=Helianthus annuus (Co...772e-47     153     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
43P05759    152   RS27A_YEAST Ubiquitin-40S ribosomal protein S...763e-47     155     100     100GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0031386; F:protein tag; IMP:SGD.::GO:0003735; F:structural constituent of ribosome; IC:SGD.
GO:0002181; P:cytoplasmic translation; IC:SGD.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0002109; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S); IMP:SGD.::GO:0000028; P:ribosomal small subunit assembly; IMP:SGD.
44P0C8R3    150   RS27B_SCHPO Ubiquitin-40S ribosomal protein S...765e-47     154     100     100GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.::GO:0006412; P:translation; IEA:InterPro.
45P0C016    150   RS27A_SCHPO Ubiquitin-40S ribosomal protein S...765e-47     154     100     100GO:0022627; C:cytosolic small ribosomal subunit; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.::GO:0006412; P:translation; IEA:InterPro.
46P69061    150   RS27A_KLULA Ubiquitin-40S ribosomal protein S...769e-47     154     100     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
47P0CG73    229   UBI1P_CANAX Polyubiquitin OS=Candida albicans...771e-45     154     97     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
48P0CG83    171   UBIQP_HORVU Polyubiquitin OS=Hordeum vulgare ...190.0002     42     95     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
49Q8RUC6    154   RUB2_ARATH Ubiquitin-NEDD8-like protein RUB2 ...769e-25     97.8     61     79GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
50P0C031    153   RUB2_ORYSJ Ubiquitin-NEDD8-like protein RUB2 ...742e-25     99.4     64     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
51P0C073    153   RUB1_DESAN Ubiquitin-NEDD8-like protein RUB1 ...741e-25     100     65     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
52P0C030    153   RUB1_ORYSJ Ubiquitin-NEDD8-like protein RUB1 ...742e-25     99.4     64     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
53Q9SHE7    156   RUB1_ARATH Ubiquitin-NEDD8-like protein RUB1 ...752e-25     99.4     63     79GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0009790; P:embryo development; IGI:TAIR.::GO:0009693; P:ethylene biosynthetic process; IMP:TAIR.::GO:0045116; P:protein neddylation; TAS:TAIR.::GO:0009733; P:response to auxin stimulus; TAS:TAIR.
54P14799    154   RS27A_NEUCR Ubiquitin-40S ribosomal protein S...762e-46     153     99     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
55P62975    76   UBIQ_RABIT Ubiquitin OS=Oryctolagus cuniculus...763e-46     150     96     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
56P68197    76   UBIQ_CERCA Ubiquitin OS=Ceratitis capitata (M...763e-46     150     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
57Q865C5    76   UBIQ_CAMDR Ubiquitin OS=Camelus dromedarius (...763e-46     150     96     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
58Q9ARZ9    155   R27AA_ORYSJ Ubiquitin-40S ribosomal protein S...764e-46     152     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
59P47905    155   RS27A_LUPAL Ubiquitin-40S ribosomal protein S...764e-46     152     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
60P0CG86    155   RS271_HORVU Ubiquitin-40S ribosomal protein S...764e-46     152     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
61P27923    155   RS27A_MAIZE Ubiquitin-40S ribosomal protein S...764e-46     152     97     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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