Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL148W
Length:
128
Number of sequences:
5887
Description:
YIL148W RPL40A SGDID:S000001410, Chr IX from 68708-68715,69150-69528, Genome Release 64-1-1, Verified ORF, "Fusion protein, identical to Rpl40Bp, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271Q3IUP2    49   RL40_NATPD 50S ribosomal protein L40e OS=Natr...350.045     33.9     54     69GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
272A8AAR8    55   RL40_IGNH4 50S ribosomal protein L40e OS=Igni...480.047     33.9     48     56GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
273Q7ZWN4    453   MIDNA_XENLA Midnolin-A OS=Xenopus laevis (Afr...780.067     35.8     27     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
274A6UUS7    47   RL40_META3 50S ribosomal protein L40e OS=Meth...350.07     33.1     54     69GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
275A3DMD0    53   RL40_STAMF 50S ribosomal protein L40e OS=Stap...370.075     33.1     54     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
276P32628    398   RAD23_YEAST UV excision repair protein RAD23 ...530.082     35.4     32     58GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000111; C:nucleotide-excision repair factor 2 complex; IDA:SGD.::GO:0000502; C:proteasome complex; IMP:SGD.
GO:0003684; F:damaged DNA binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IPI:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0000715; P:nucleotide-excision repair, DNA damage recognition; TAS:SGD.::GO:0006517; P:protein deglycosylation; IDA:SGD.
277P62026    47   RL40_METMP 50S ribosomal protein L40e OS=Meth...340.084     33.1     56     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
278A6VIE1    47   RL40_METM7 50S ribosomal protein L40e OS=Meth...340.084     33.1     56     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
279A9A8E3    47   RL40_METM6 50S ribosomal protein L40e OS=Meth...340.084     33.1     56     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
280A4G037    47   RL40_METM5 50S ribosomal protein L40e OS=Meth...340.084     33.1     56     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
281Q0W4J1    48   RL40_UNCMA 50S ribosomal protein L40e OS=Uncu...320.088     33.1     63     69GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
282P0C895    374   Y2010_ARATH LRR repeats and ubiquitin-like do...610.091     35     34     56
283Q3UUE9    192   ANKUB_MOUSE Protein ANKUB1 OS=Mus musculus (M...740.099     35     30     49
284Q8TXM1    49   RL40_METKA 50S ribosomal protein L40e OS=1009...350.12     32.7     54     66GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
285Q12VH3    49   RL40_METBU 50S ribosomal protein L40e OS=Meth...350.12     32.7     57     66GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
286Q9UHD9    624   UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens (Huma...850.12     35     33     48GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0008219; P:cell death; IEA:UniProtKB-KW.
287B1YA13    53   RL40_THENV 50S ribosomal protein L40e OS=Ther...480.16     32.3     42     56GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
288Q6GL38    240   UBTD1_XENTR Ubiquitin domain-containing prote...450.19     34.3     38     51
289A1RRS5    53   RL40_PYRIL 50S ribosomal protein L40e OS=Pyro...480.24     32     38     54GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
290P54058    47   RL40_METJA 50S ribosomal protein L40e OS=JCM ...340.27     32     56     65GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
291Q5R974    963   IPO13_PONAB Importin-13 OS=Pongo abelii (Suma...540.32     33.9     37     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
292Q96S82    380   UBL7_HUMAN Ubiquitin-like protein 7 OS=Homo s...480.46     33.1     44     65
293Q2KIS3    380   UBL7_BOVIN Ubiquitin-like protein 7 OS=Bos ta...480.47     33.1     44     65
294Q91W67    380   UBL7_MOUSE Ubiquitin-like protein 7 OS=Mus mu...480.47     33.1     44     65
295O94338    215   YHM5_SCHPO AN1-type zinc finger protein C1271...720.51     32.7     19     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
296B8GFB9    48   RL40_METPE 50S ribosomal protein L40e OS=Meth...320.57     30.8     56     66GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
297Q980V5    56   RL40_SULSO 50S ribosomal protein L40e OS=P2)....340.63     30.8     56     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
298C3N855    56   RL40_SULIY 50S ribosomal protein L40e OS=Sulf...340.63     30.8     56     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
299C3NF56    56   RL40_SULIN 50S ribosomal protein L40e OS=Sulf...340.63     30.8     56     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
300C3MYS6    56   RL40_SULIM 50S ribosomal protein L40e OS=Sulf...340.63     30.8     56     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
301C3MJ34    56   RL40_SULIL 50S ribosomal protein L40e OS=Sulf...340.63     30.8     56     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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