Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List


UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL148W
Length:
128
Number of sequences:
5887
Description:
YIL148W RPL40A SGDID:S000001410, Chr IX from 68708-68715,69150-69528, Genome Release 64-1-1, Verified ORF, "Fusion protein, identical to Rpl40Bp, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q15646    514   OASL_HUMAN 59 kDa 2'-5'-oligoadenylate syntha...690.000002     49.3     36     57GO:0005829; C:cytosol; TAS:Reactome.::GO:0005730; C:nucleolus; TAS:UniProtKB.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0003677; F:DNA binding; TAS:UniProtKB.::GO:0003725; F:double-stranded RNA binding; TAS:UniProtKB.::GO:0046966; F:thyroid hormone receptor binding; TAS:UniProtKB.::GO:0016740; F:transferase activity; IEA:InterPro.
GO:0060333; P:interferon-gamma-mediated signaling pathway; TAS:Reactome.::GO:0060337; P:type I interferon-mediated signaling pathway; TAS:Reactome.
212Q96PU4    802   UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2...740.000002     49.3     38     61GO:0005720; C:nuclear heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:HGNC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEP:HGNC.::GO:0008283; P:cell proliferation; IEP:HGNC.::GO:0071158; P:positive regulation of cell cycle arrest; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:HGNC.
213Q9HAC8    227   UBTD1_HUMAN Ubiquitin domain-containing prote...670.000002     48.1     34     55
214Q3ZBQ1    227   UBTD1_BOVIN Ubiquitin domain-containing prote...670.000002     48.1     34     55
215Q6MG49    1146   BAG6_RAT Large proline-rich protein BAG6 OS=R...720.000002     49.3     36     57GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0042127; P:regulation of cell proliferation; IEP:RGD.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
216Q54L35    80   NED82_DICDI NEDD8-like protein 2 OS=Dictyoste...640.000003     45.8     39     59
217O02741    154   ISG15_BOVIN Ubiquitin-like protein ISG15 OS=B...760.000003     46.6     33     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0009615; P:response to virus; IEA:UniProtKB-KW.
218Q96T88    793   UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1...740.000004     48.5     39     64GO:0005634; C:nucleus; IDA:BHF-UCL.
GO:0000987; F:core promoter proximal region sequence-specific DNA binding; IDA:BHF-UCL.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008327; F:methyl-CpG binding; IDA:UniProtKB.::GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; IEP:BHF-UCL.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0032270; P:positive regulation of cellular protein metabolic process; IDA:BHF-UCL.::GO:2000373; P:positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity; IC:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IC:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
219Q9CQ84    188   UBL4B_MOUSE Ubiquitin-like protein 4B OS=Mus ...720.000004     47     31     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
220Q8N7F7    174   UBL4B_HUMAN Ubiquitin-like protein 4B OS=Homo...720.000005     46.6     31     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
221Q4V8W7    227   UBTD1_DANRE Ubiquitin domain-containing prote...710.000006     47     37     55
222Q5EAE3    234   UBTD2_BOVIN Ubiquitin domain-containing prote...700.000006     47     31     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
223Q640W6    234   UBTD1_XENLA Ubiquitin domain-containing prote...700.000007     47     31     59
224P46379    1132   BAG6_HUMAN Large proline-rich protein BAG6 OS...720.000008     47.8     35     57GO:0071818; C:BAT3 complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; IDA:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; IMP:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; IDA:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; IDA:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
225Q9Z1R2    1154   BAG6_MOUSE Large proline-rich protein BAG6 OS...720.000008     47.8     35     57GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0030544; F:Hsp70 protein binding; IPI:UniProtKB.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0070628; F:proteasome binding; IDA:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:UniProtKB.::GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; IMP:UniProtKB.::GO:0007420; P:brain development; IMP:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; IMP:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; IMP:UniProtKB.::GO:0030324; P:lung development; IMP:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0050821; P:protein stabilization; IMP:UniProtKB.::GO:0007283; P:spermatogenesis; IMP:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; IMP:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:UniProtKB.
226A5D9M6    1128   BAG6_PIG Large proline-rich protein BAG6 OS=S...720.000009     47.4     35     57GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
227Q7TMI3    803   UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2...740.00001     47     36     61GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:HGNC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; ISS:HGNC.::GO:0008283; P:cell proliferation; ISS:HGNC.::GO:0071158; P:positive regulation of cell cycle arrest; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:HGNC.
228Q6PGH0    234   UBTD2_MOUSE Ubiquitin domain-containing prote...700.00001     46.2     31     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
229Q54TK0    96   NED81_DICDI NEDD8-like protein 1 OS=Dictyoste...530.00001     44.3     40     60
230Q8WUN7    234   UBTD2_HUMAN Ubiquitin domain-containing prote...700.00002     45.8     30     57GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
231Q15459    793   SF3A1_HUMAN Splicing factor 3A subunit 1 OS=H...690.00002     46.6     30     58GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005684; C:U2-type spliceosomal complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0000389; P:nuclear mRNA 3'-splice site recognition; TAS:HGNC.
232A2VDN6    793   SF3A1_BOVIN Splicing factor 3A subunit 1 OS=B...690.00002     46.6     30     58GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
233Q54LV1    342   RAD23_DICDI UV excision repair protein RAD23 ...720.00002     45.8     32     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
234Q4KMA2    415   RD23B_RAT UV excision repair protein RAD23 ho...680.00003     45.8     34     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
235Q8K4Z5    791   SF3A1_MOUSE Splicing factor 3A subunit 1 OS=M...690.00003     45.8     30     58GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
236P54727    409   RD23B_HUMAN UV excision repair protein RAD23 ...680.00003     45.4     34     62GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; IDA:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc.
GO:0000715; P:nucleotide-excision repair, DNA damage recognition; IDA:UniProtKB.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
237P54728    416   RD23B_MOUSE UV excision repair protein RAD23 ...680.00003     45.4     34     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI.
238Q84L31    419   RD23C_ARATH Putative DNA repair protein RAD23...740.00004     45.4     34     58GO:0005634; C:nucleus; IDA:TAIR.
GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
239Q6DG43    240   UBTD2_DANRE Ubiquitin domain-containing prote...700.00005     44.7     27     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
240P63072    162   UBD_MOUSE Ubiquitin D OS=Mus musculus (Mouse)...780.003     38.9     28     51GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0070628; F:proteasome binding; ISS:UniProtKB.
GO:0070842; P:aggresome assembly; ISS:UniProtKB.::GO:0043011; P:myeloid dendritic cell differentiation; ISS:UniProtKB.::GO:0035417; P:negative regulation of mitotic prometaphase; ISS:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IMP:UniProtKB.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; IMP:UniProtKB.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.::GO:0034341; P:response to interferon-gamma; IEP:UniProtKB.::GO:0034612; P:response to tumor necrosis factor; IEP:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:UniProtKB.
241P48510    373   DSK2_YEAST Ubiquitin domain-containing protei...560.00008     44.3     39     57GO:0005635; C:nuclear envelope; IGI:GOC.
GO:0030674; F:protein binding, bridging; IMP:SGD.
GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0007103; P:spindle pole body duplication in nuclear envelope; IGI:SGD.
records
Previous ‹‹ ›› Next Total records: 343 211 - 240
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::