Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL126W
Length:
1359
Number of sequences:
5887
Description:
YIL126W STH1 SGDID:S000001388, Chr IX from 117992-122071, Genome Release 64-1-1, Verified ORF, "ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; essential helicase-related protein homologous to Snf2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q5NC05    1138   TTF2_MOUSE Transcription termination factor 2...2770.00000000000005     81.3     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
212Q9UNY4    1162   TTF2_HUMAN Transcription termination factor 2...2760.0000000000002     79.3     28     45GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0008023; C:transcription elongation factor complex; TAS:ProtInc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:ProtInc.
213Q753V5    1085   RAD5_ASHGO DNA repair protein RAD5 OS=Y-1056)...3290.00000000000008     80.5     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
214Q0P4U8    942   SMAL1_XENTR SWI/SNF-related matrix-associated...1500.00000000000004     81.6     31     55GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
215Q498E7    960   SMAL1_XENLA SWI/SNF-related matrix-associated...1500.0000000000002     79     30     55GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
216Q09948    542   RSC4_SCHPO Chromatin structure-remodeling com...750.00000002     62.8     37     61GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
217Q9TTA5    941   SMAL1_BOVIN SWI/SNF-related matrix-associated...2170.00000000005     71.2     29     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
218Q86U86    1689   PB1_HUMAN Protein polybromo-1 OS=Homo sapiens...531.8     37     36     57GO:0000228; C:nuclear chromosome; NAS:UniProtKB.
GO:0003682; F:chromatin binding; NAS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006338; P:chromatin remodeling; TAS:UniProtKB.::GO:0007067; P:mitosis; TAS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
219Q9M658    2001   MOM1_ARATH Helicase protein MOM1 OS=Arabidops...2020.00000000002     72.8     28     46GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006344; P:maintenance of chromatin silencing; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
220Q8BSQ9    1634   PB1_MOUSE Protein polybromo-1 OS=Mus musculus...537.8     34.7     34     57GO:0000776; C:kinetochore; IDA:MGI.::GO:0005634; C:nucleus; IC:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0001974; P:blood vessel remodeling; TAS:DFLAT.::GO:0060948; P:cardiac vascular smooth muscle cell development; TAS:DFLAT.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0003349; P:epicardium-derived cardiac endothelial cell differentiation; TAS:DFLAT.::GO:0003007; P:heart morphogenesis; TAS:DFLAT.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.::GO:0001890; P:placenta development; IMP:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; TAS:DFLAT.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0060979; P:vasculogenesis involved in coronary vascular morphogenesis; TAS:DFLAT.
221Q90941    1633   PB1_CHICK Protein polybromo-1 OS=Gallus gallu...532.1     36.6     36     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
222O74964    803   RSC1_SCHPO Chromatin structure-remodeling com...720.000000001     67     40     64GO:0000790; C:nuclear chromatin; ISS:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
223Q9UUK2    454   GCN5_SCHPO Histone acetyltransferase gcn5 OS=...1120.00000002     62     31     54GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.
GO:0010484; F:H3 histone acetyltransferase activity; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IGI:PomBase.::GO:0044154; P:histone H3-K14 acetylation; TAS:PomBase.::GO:0043971; P:histone H3-K18 acetylation; TAS:PomBase.::GO:0043972; P:histone H3-K23 acetylation; TAS:PomBase.::GO:0043970; P:histone H3-K9 acetylation; TAS:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
224Q8WZM0    464   GCN5_YARLI Histone acetyltransferase GCN5 OS=...950.000003     55.1     32     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
225Q06554    1556   IRC20_YEAST Uncharacterized ATP-dependent hel...1860.27     39.7     25     43GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; IMP:SGD.
226Q84XV2    386   GTE1_ARATH Transcription factor GTE1 OS=Arabi...670.00001     53.1     42     61GO:0005634; C:nucleus; IDA:TAIR.
GO:0010030; P:positive regulation of seed germination; IMP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
227Q149N8    1683   SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH...460.24     39.7     41     65GO:0000786; C:nucleosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
228Q7TPQ3    1674   SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH...460.2     40     41     65GO:0000786; C:nucleosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
229Q9Y7N0    578   BDF1_SCHPO SWR1 complex bromodomain subunit b...759.7     34.3     28     43GO:0000812; C:Swr1 complex; IDA:PomBase.
230Q93YS6    688   GTE9_ARATH Transcription factor GTE9 OS=Arabi...610.00004     52     41     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
231Q9NRL2    1556   BAZ1A_HUMAN Bromodomain adjacent to zinc fing...1180.00004     52     31     49GO:0016590; C:ACF complex; TAS:BHF-UCL.::GO:0008623; C:chromatin accessibility complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; TAS:BHF-UCL.::GO:0006261; P:DNA-dependent DNA replication; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; NAS:BHF-UCL.
232Q9UTL9    1375   YIV5_SCHPO Uncharacterized ATP-dependent heli...1310.0003     49.3     27     44GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; ISS:PomBase.
233Q338B9    511   GCN5_ORYSJ Histone acetyltransferase GCN5 OS=...950.00009     50.4     31     51
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
234B2RWS6    2415   EP300_MOUSE Histone acetyltransferase p300 OS...1410.0002     50.1     30     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000123; C:histone acetyltransferase complex; IEA:InterPro.::GO:0005667; C:transcription factor complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; ISS:UniProtKB.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; IMP:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0051216; P:cartilage development; NAS:UniProtKB.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043967; P:histone H4 acetylation; ISS:UniProtKB.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043627; P:response to estrogen stimulus; ISS:UniProtKB.::GO:0001666; P:response to hypoxia; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
235Q9FT54    369   GTE6_ARATH Transcription factor GTE6 OS=Arabi...700.0002     48.9     47     63GO:0005634; C:nucleus; IDA:TAIR.
GO:0004402; F:histone acetyltransferase activity; IDA:TAIR.
GO:0006338; P:chromatin remodeling; IDA:TAIR.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
236P87152    992   SPT7_SCHPO Transcriptional activator spt7 OS=...840.0002     49.7     36     54GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0016573; P:histone acetylation; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; IC:PomBase.
237Q9LK27    813   GTE8_ARATH Transcription factor GTE8 OS=Arabi...860.0002     49.3     31     49GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
238O88379    1555   BAZ1A_MOUSE Bromodomain adjacent to zinc fing...2220.0002     49.7     24     42GO:0000228; C:nuclear chromosome; IDA:MGI.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; TAS:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
239Q9W0T1    2669   NU301_DROME Nucleosome-remodeling factor subu...910.0004     48.9     29     53GO:0016589; C:NURF complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0035076; P:ecdysone receptor-mediated signaling pathway; IGI:FlyBase.::GO:0030097; P:hemopoiesis; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0042766; P:nucleosome mobilization; IDA:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IMP:FlyBase.::GO:0035073; P:pupariation; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IDA:FlyBase.
240P13709    2038   FSH_DROME Homeotic protein female sterile OS=...630.0004     48.9     40     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:FlyBase.::GO:0007362; P:terminal region determination; IMP:FlyBase.
241Q02206    625   RSC4_YEAST Chromatin structure-remodeling com...840.0005     48.1     27     55GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:SGD.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
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