Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL115C
Length:
1460
Number of sequences:
5887
Description:
YIL115C NUP159 SGDID:S000001377, Chr IX from 148709-144327, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleoporin, subunit of the Nup82 subcomplex of the nuclear pore; part of the nuclear pore that is found exclusively on the cytoplasmic side; required for mRNA export; regulates ADP release from the ATP-dependent RNA helicase Dbp5p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40477    1460   NU159_YEAST Nucleoporin NUP159 OS=Saccharomyc...14600     2950     100     100GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006611; P:protein export from nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.
2Q09847    1325   NU146_SCHPO Nucleoporin nup146 OS=Schizosacch...9570.00000000001     73.6     24     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
3P49686    430   NUP42_YEAST Nucleoporin NUP42 OS=Saccharomyce...2530.000000002     65.5     35     50GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
4Q0KFR8    588   DNAA_CUPNH Chromosomal replication initiator ...820.022     42.7     34     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003688; F:DNA replication origin binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006270; P:DNA-dependent DNA replication initiation; IEA:InterPro.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
5P35658    2090   NU214_HUMAN Nuclear pore complex protein Nup2...2220.024     43.1     26     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0006611; P:protein export from nucleus; IMP:MGI.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
6Q6CC84    980   SPT5_YARLI Transcription elongation factor SP...1290.033     42.4     34     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q10540    443   PPE13_MYCTU Uncharacterized PPE family protei...1780.049     41.6     29     38GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0044119; P:growth of symbiont in host cell; IMP:MTBBASE.
8Q966L9    974   GLH2_CAEEL ATP-dependent RNA helicase glh-2 O...1162.8     36.2     30     38GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0043621; F:protein self-association; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IDA:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0009791; P:post-embryonic development; IMP:WormBase.
9P52948    1817   NUP98_HUMAN Nuclear pore complex protein Nup9...1430.45     38.9     31     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:ProtInc.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0017056; F:structural constituent of nuclear pore; NAS:UniProtKB.::GO:0005215; F:transporter activity; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006260; P:DNA replication; IMP:UniProtKB.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; NAS:UniProtKB.::GO:0000059; P:protein import into nucleus, docking; NAS:UniProtKB.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
10Q21338    1208   SPT5H_CAEEL Transcription elongation factor S...1100.61     38.5     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11P49793    1816   NUP98_RAT Nuclear pore complex protein Nup98-...1430.69     38.1     32     44GO:0005654; C:nucleoplasm; IDA:RGD.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0042277; F:peptide binding; IDA:RGD.::GO:0005515; F:protein binding; IPI:RGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000059; P:protein import into nucleus, docking; IMP:RGD.
12Q02199    472   NUP49_YEAST Nucleoporin NUP49/NSP49 OS=Saccha...620.74     37.7     39     55GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
13O42963    403   NUP44_SCHPO Nucleoporin nup44 OS=Schizosaccha...1351     37.4     30     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
14Q9D529    359   WBP2L_MOUSE Postacrosomal sheath WW domain-bi...1496.6     34.7     25     34GO:0033011; C:perinuclear theca; ISS:HGNC.
GO:0050699; F:WW domain binding; ISS:HGNC.
GO:0007343; P:egg activation; ISS:HGNC.::GO:0035039; P:male pronucleus assembly; ISS:HGNC.
15A4J5X2    985   IF2_DESRM Translation initiation factor IF-2 ...1201.8     37     23     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
16O60318    1980   MCM3A_HUMAN 80 kDa MCM3-associated protein OS...2112.1     36.6     33     39GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006260; P:DNA replication; TAS:ProtInc.::GO:0006606; P:protein import into nucleus; TAS:ProtInc.
17P14907    823   NSP1_YEAST Nucleoporin NSP1 OS=Saccharomyces ...802.3     36.6     39     53GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005543; F:phospholipid binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
18Q6BZG0    967   SPT5_DEBHA Transcription elongation factor SP...1433.5     35.8     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q9M081    1080   SC24B_ARATH Protein transport protein Sec24-l...1033.9     35.8     33     43GO:0030127; C:COPII vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IEA:InterPro.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
20Q80U93    2085   NU214_MOUSE Nuclear pore complex protein Nup2...575.4     35.4     39     63GO:0005643; C:nuclear pore; TAS:MGI.
GO:0005487; F:nucleocytoplasmic transporter activity; IMP:MGI.
GO:0006406; P:mRNA export from nucleus; IMP:MGI.::GO:0006606; P:protein import into nucleus; IMP:MGI.::GO:0051726; P:regulation of cell cycle; IMP:MGI.
21Q9UTK4    1778   NU189_SCHPO Nucleoporin nup189 OS=Schizosacch...2199.4     34.7     26     42GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0031080; C:Nup107-160 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006997; P:nucleus organization; IMP:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
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