Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL079C
Length:
360
Number of sequences:
5887
Description:
YIL079C AIR1 SGDID:S000001341, Chr IX from 212005-210923, Genome Release 64-1-1, reverse complement, Verified ORF, "Zinc knuckle protein, involved in nuclear RNA processing and degradation as a component of the TRAMP complex; stimulates the poly(A) polymerase activity of Pap2p in vitro; functionally redundant with Air2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40507    360   AIR1_YEAST Protein AIR1 OS=Saccharomyces cere...3600     751     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0031499; C:TRAMP complex; IDA:SGD.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043629; P:ncRNA polyadenylation; IDA:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IGI:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IGI:SGD.::GO:0071036; P:nuclear polyadenylation-dependent snoRNA catabolic process; IGI:SGD.::GO:0071037; P:nuclear polyadenylation-dependent snRNA catabolic process; IGI:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.
2Q12476    344   AIR2_YEAST Protein AIR2 OS=Saccharomyces cere...3191e-97     300     50     64GO:0005730; C:nucleolus; IDA:SGD.::GO:0031499; C:TRAMP complex; IDA:SGD.
GO:0030674; F:protein binding, bridging; IMP:SGD.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043629; P:ncRNA polyadenylation; IDA:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IGI:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IGI:SGD.::GO:0071036; P:nuclear polyadenylation-dependent snoRNA catabolic process; IGI:SGD.::GO:0071037; P:nuclear polyadenylation-dependent snRNA catabolic process; IGI:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0006400; P:tRNA modification; IMP:SGD.
3Q9P795    313   AIR1_SCHPO Protein air1 OS=Schizosaccharomyce...2151e-27     114     35     49GO:0005730; C:nucleolus; ISS:PomBase.::GO:0031499; C:TRAMP complex; IDA:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043630; P:ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process; ISS:PomBase.::GO:0016075; P:rRNA catabolic process; ISS:PomBase.::GO:0016077; P:snoRNA catabolic process; ISS:PomBase.::GO:0016076; P:snRNA catabolic process; ISS:PomBase.::GO:0016078; P:tRNA catabolic process; ISS:PomBase.
4A1L2T6    563   ZCHC7_XENLA Zinc finger CCHC domain-containin...1760.0000000000001     75.9     34     44
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
5B1WC15    542   ZCHC7_RAT Zinc finger CCHC domain-containing ...1310.00000000004     67.8     34     46
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
6B1AX39    541   ZCHC7_MOUSE Zinc finger CCHC domain-containin...1280.00000000005     67.4     35     45
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
7Q2KIN0    546   ZCHC7_BOVIN Zinc finger CCHC domain-containin...1310.00000000006     67.4     34     45
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
8Q8N3Z6    543   ZCHC7_HUMAN Zinc finger CCHC domain-containin...1430.00000001     60.1     31     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
9Q04832    271   HEXP_LEIMA DNA-binding protein HEXBP OS=Leish...962.5     33.5     29     33GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
10P36627    179   BYR3_SCHPO Cellular nucleic acid-binding prot...1150.0001     45.4     30     37GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000747; P:conjugation with cellular fusion; IMP:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IGI:PomBase.
11Q9NUD5    404   ZCHC3_HUMAN Zinc finger CCHC domain-containin...590.0005     45.4     37     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
12P03354    1603   POL_RSVP Gag-Pro-Pol polyprotein OS=Rous sarc...580.001     44.3     34     52GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0016032; P:viral reproduction; IEA:InterPro.
13P63128    1117   POK4_HUMAN HERV-K_6q14.1 provirus ancestral G...760.004     43.1     30     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046080; P:dUTP metabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0016032; P:viral reproduction; IEA:InterPro.
14O92956    1603   POL_RSVSB Gag-Pro-Pol polyprotein OS=Rous sar...580.005     42.7     33     53GO:0019028; C:viral capsid; IEA:InterPro.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:InterPro.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0016032; P:viral reproduction; IEA:InterPro.
15Q8T8R1    165   Y3800_DROME CCHC-type zinc finger protein CG3...761.8     33.5     29     38
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
16Q04095    1603   POL_RSVSA Gag-Pro-Pol polyprotein OS=Schmidt-...580.006     42.4     33     52GO:0019028; C:viral capsid; IEA:InterPro.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0016032; P:viral reproduction; IEA:InterPro.
17P87889    666   GAK10_HUMAN HERV-K_5q33.3 provirus ancestral ...920.016     40.8     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; NAS:UniProtKB.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
18P63126    666   GAK4_HUMAN HERV-K_6q14.1 provirus ancestral G...920.016     40.8     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
19P63145    666   GAK11_HUMAN HERV-K_22q11.21 provirus ancestra...920.016     40.8     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
20P62683    666   GAK1_HUMAN HERV-K_12q14.1 provirus ancestral ...920.018     40.8     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
21P63130    666   GAK12_HUMAN HERV-K_1q22 provirus ancestral Ga...920.018     40.8     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
22P62684    666   GAK5_HUMAN HERV-K_19p13.11 provirus ancestral...920.018     40.8     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
23P62685    647   GAK6_HUMAN HERV-K_8p23.1 provirus ancestral G...920.019     40.4     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
24Q9YNA8    666   GAK3_HUMAN HERV-K_19q12 provirus ancestral Ga...920.02     40.4     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
25Q9HDB9    667   GAK8_HUMAN HERV-K_3q12.3 provirus ancestral G...1060.02     40.4     30     42GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
26Q8N567    271   ZCHC9_HUMAN Zinc finger CCHC domain-containin...993.2     33.1     26     35
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB.
27Q7LDI9    666   GAK2_HUMAN HERV-K_7p22.1 provirus ancestral G...920.021     40.4     28     41GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
28P03322    701   GAG_RSVP Gag-Pro polyprotein OS=Rous sarcoma ...580.047     39.3     34     52GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro.
29Q9HFF2    218   YL92_SCHPO Uncharacterized protein C683.02c O...9410     31.2     26     30GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
30O76743    1156   GLH4_CAEEL ATP-dependent RNA helicase glh-4 O...711.7     34.7     27     41GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007276; P:gamete generation; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.
31P53849    153   GIS2_YEAST Zinc finger protein GIS2 OS=Saccha...1062.4     32.7     26     40GO:0042788; C:polysomal ribosome; IPI:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0003697; F:single-stranded DNA binding; IDA:SGD.::GO:0045182; F:translation regulator activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045727; P:positive regulation of translation; IDA:SGD.
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