Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL076W
Length:
296
Number of sequences:
5887
Description:
YIL076W SEC28 SGDID:S000001338, Chr IX from 216658-217548, Genome Release 64-1-1, Verified ORF, "Epsilon-COP subunit of the coatomer; regulates retrograde Golgi-to-ER protein traffic; stabilizes Cop1p, the alpha-COP and the coatomer complex; non-essential for cell growth"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40509    296   COPE_YEAST Coatomer subunit epsilon OS=Saccha...2960     595     100     100GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IEA:InterPro.::GO:0006901; P:vesicle coating; IGI:SGD.
2Q60445    308   COPE_CRIGR Coatomer subunit epsilon OS=Cricet...3230.001     43.5     22     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IEA:InterPro.
3Q5RFR8    308   COPE_PONAB Coatomer subunit epsilon OS=Pongo ...3230.001     43.5     23     39GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IEA:InterPro.
4O14579    308   COPE_HUMAN Coatomer subunit epsilon OS=Homo s...3230.002     43.1     22     39GO:0030126; C:COPI vesicle coat; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006891; P:intra-Golgi vesicle-mediated transport; ISS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:Reactome.
5Q28104    308   COPE_BOVIN Coatomer subunit epsilon OS=Bos ta...3230.002     42.4     21     39GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
6O89079    308   COPE_MOUSE Coatomer subunit epsilon OS=Mus mu...3230.003     42.4     22     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IEA:InterPro.
7O29246    154   Y1016_ARCFU Uncharacterized protein AF_1016 O...602.7     32.3     30     57GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
8Q81R81    562   SYR2_BACAN Arginine--tRNA ligase 2 OS=Bacillu...774.3     32.7     35     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004814; F:arginine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
9O64748    293   COPE2_ARATH Coatomer subunit epsilon-2 OS=Ara...3055.8     32     23     39GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IEA:InterPro.
records
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