Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL061C
Length:
300
Number of sequences:
5887
Description:
YIL061C SNP1 SGDID:S000001323, Chr IX from 245559-244657, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721Q293V6    154   NCBP2_DROPS Nuclear cap-binding protein subun...1002.7     32.3     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
722B4GLK8    154   NCBP2_DROPE Nuclear cap-binding protein subun...1002.7     32.3     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
723A8Y1R8    157   NCBP2_CAEBR Nuclear cap-binding protein subun...982.7     32.3     21     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
724B4N1L0    269   EI3G1_DROWI Eukaryotic translation initiation...682.7     33.1     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
725Q8WXA9    508   SREK1_HUMAN Splicing regulatory glutamine/lys...802.8     33.1     33     54GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
726Q9D8T7    112   SLIRP_MOUSE SRA stem-loop-interacting RNA-bin...462.8     31.6     26     57GO:0005739; C:mitochondrion; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
727B4MA85    269   EI3G1_DROVI Eukaryotic translation initiation...682.8     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
728Q29GU0    269   EI3G1_DROPS Eukaryotic translation initiation...682.8     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
729B4GUY6    269   EI3G1_DROPE Eukaryotic translation initiation...682.8     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
730O43251    390   RFOX2_HUMAN RNA binding protein fox-1 homolog...832.8     33.1     20     53GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IDA:UniProtKB.
GO:0030520; P:intracellular estrogen receptor signaling pathway; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:BHF-UCL.::GO:0042127; P:regulation of cell proliferation; TAS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
731B4Q0Y7    269   EI3G1_DROYA Eukaryotic translation initiation...682.9     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
732B3P935    269   EI3G1_DROER Eukaryotic translation initiation...682.9     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
733B4L710    269   EI3G1_DROMO Eukaryotic translation initiation...683     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
734Q5ZM16    420   RBM22_CHICK Pre-mRNA-splicing factor RBM22 OS...713.1     33.1     30     52GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005487; F:nucleocytoplasmic transporter activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033554; P:cellular response to stress; ISS:UniProtKB.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0090316; P:positive regulation of intracellular protein transport; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.
735Q9W4X7    269   EI3G1_DROME Eukaryotic translation initiation...683.1     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007067; P:mitosis; IMP:FlyBase.::GO:0000022; P:mitotic spindle elongation; IMP:FlyBase.
736Q55GD6    359   SF3B4_DICDI Splicing factor 3B subunit 4 OS=D...677     32     30     49GO:0005681; C:spliceosomal complex; ISS:dictyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; ISS:dictyBase.
737Q9JKL7    494   SREK1_RAT Splicing regulatory glutamine/lysin...803.2     33.1     33     54GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
738B4NTY9    269   EI3G1_DROSI Eukaryotic translation initiation...683.2     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
739B4I9X1    269   EI3G1_DROSE Eukaryotic translation initiation...683.2     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
740B3MYX2    270   EI3G1_DROAN Eukaryotic translation initiation...683.6     32.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
741Q07623    225   NOP6_YEAST Nucleolar protein 6 OS=Saccharomyc...473.8     32.3     38     57GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0019843; F:rRNA binding; IDA:SGD.
GO:0042274; P:ribosomal small subunit biogenesis; IGI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
742Q1HQN4    272   EIF3G_AEDAE Eukaryotic translation initiation...684.1     32.3     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
743Q4R627    581   LARP7_MACFA La-related protein 7 OS=Macaca fa...564.1     32.7     34     57GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
744B0VZS1    272   EIF3G_CULQU Eukaryotic translation initiation...684.1     32.3     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
745Q642J5    373   RFOX1_DANRE RNA binding protein fox-1 homolog...894.3     32.7     22     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0021854; P:hypothalamus development; IMP:ZFIN.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
746Q5BDC8    520   NOP12_EMENI Nucleolar protein 12 OS=194 / M13...1054.5     32.7     26     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
747Q8BHS3    420   RBM22_MOUSE Pre-mRNA-splicing factor RBM22 OS...714.5     32.3     30     52GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0005487; F:nucleocytoplasmic transporter activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033554; P:cellular response to stress; ISS:UniProtKB.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0090316; P:positive regulation of intracellular protein transport; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.
748Q4R4J1    420   RBM22_MACFA Pre-mRNA-splicing factor RBM22 OS...714.5     32.3     30     52GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005487; F:nucleocytoplasmic transporter activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033554; P:cellular response to stress; ISS:UniProtKB.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0090316; P:positive regulation of intracellular protein transport; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.
749Q9NW64    420   RBM22_HUMAN Pre-mRNA-splicing factor RBM22 OS...714.5     32.3     30     52GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0048306; F:calcium-dependent protein binding; IPI:UniProtKB.::GO:0005487; F:nucleocytoplasmic transporter activity; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; IDA:UniProtKB.::GO:0017069; F:snRNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033554; P:cellular response to stress; IDA:UniProtKB.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IDA:UniProtKB.::GO:0090316; P:positive regulation of intracellular protein transport; IDA:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; IDA:UniProtKB.::GO:0000060; P:protein import into nucleus, translocation; IDA:UniProtKB.
750B4NFY1    268   EI3G2_DROWI Eukaryotic translation initiation...594.5     32.3     27     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
751Q5RAY5    420   RBM22_PONAB Pre-mRNA-splicing factor RBM22 OS...714.6     32.3     30     52GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005487; F:nucleocytoplasmic transporter activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033554; P:cellular response to stress; ISS:UniProtKB.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0090316; P:positive regulation of intracellular protein transport; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.
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