Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL026C
Length:
1150
Number of sequences:
5887
Description:
YIL026C IRR1 SGDID:S000001288, Chr IX from 307929-304477, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the cohesin complex, which is required for sister chromatid cohesion during mitosis and meiosis and interacts with centromeres and chromosome arms, essential for viability"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40541    1150   SCC3_YEAST Cohesin subunit SCC3 OS=Saccharomy...11500     2342     100     100GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0034990; C:nuclear mitotic cohesin complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000755; P:cytogamy; IMP:SGD.::GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0007064; P:mitotic sister chromatid cohesion; IMP:SGD.::GO:0006473; P:protein acetylation; IDA:UniProtKB.::GO:0009847; P:spore germination; IMP:SGD.
2O13816    962   SCC3_SCHPO Cohesin subunit psc3 OS=Schizosacc...3446e-36     151     28     50GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0000794; C:condensed nuclear chromosome; IC:PomBase.::GO:0030892; C:mitotic cohesin complex; IDA:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007064; P:mitotic sister chromatid cohesion; IMP:PomBase.
3Q8WVM7    1258   STAG1_HUMAN Cohesin subunit SA-1 OS=Homo sapi...4194e-23     110     26     45GO:0030054; C:cell junction; IDA:HPA.::GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007091; P:mitotic metaphase/anaphase transition; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.
4Q9D3E6    1258   STAG1_MOUSE Cohesin subunit SA-1 OS=Mus muscu...4215e-23     110     26     45GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
5Q9DGN1    1265   STAG1_XENLA Cohesin subunit SA-1 OS=Xenopus l...4153e-22     107     27     45GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
6Q9UJ98    1225   STAG3_HUMAN Cohesin subunit SA-3 OS=Homo sapi...4419e-21     102     23     43GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0030893; C:meiotic cohesin complex; IDA:UniProtKB.::GO:0000795; C:synaptonemal complex; TAS:ProtInc.
GO:0005488; F:binding; IEA:InterPro.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007130; P:synaptonemal complex assembly; TAS:ProtInc.
7Q99M76    1256   STAG3_RAT Cohesin subunit SA-3 OS=Rattus norv...3933e-20     101     26     45
GO:0005488; F:binding; IEA:InterPro.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; TAS:RGD.
8O70576    1240   STAG3_MOUSE Cohesin subunit SA-3 OS=Mus muscu...4414e-20     100     24     45GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0001673; C:male germ cell nucleus; IDA:MGI.::GO:0030893; C:meiotic cohesin complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000802; C:transverse filament; IDA:MGI.
GO:0005488; F:binding; IEA:InterPro.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
9Q8N3U4    1231   STAG2_HUMAN Cohesin subunit SA-2 OS=Homo sapi...3426e-20     100     28     48GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007091; P:mitotic metaphase/anaphase transition; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0032876; P:negative regulation of DNA endoreduplication; IMP:BHF-UCL.::GO:0007062; P:sister chromatid cohesion; IMP:BHF-UCL.
10O35638    1231   STAG2_MOUSE Cohesin subunit SA-2 OS=Mus muscu...3426e-20     100     28     48GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
11Q9DGN0    1194   STAG2_XENLA Cohesin subunit SA-2 OS=Xenopus l...3423e-19     97.8     27     47GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
12P0CL84    134   ST3L2_HUMAN STAG3-like protein 2 OS=Homo sapi...1040.004     42.4     29     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
13P0CL85    134   ST3L3_HUMAN STAG3-like protein 3 OS=Homo sapi...570.005     42     35     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
14Q92380    923   REC11_SCHPO Meiotic recombination protein rec...3610.006     44.3     22     38GO:0030893; C:meiotic cohesin complex; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0045143; P:homologous chromosome segregation; TAS:PomBase.::GO:0042138; P:meiotic DNA double-strand break formation; IMP:PomBase.::GO:0051177; P:meiotic sister chromatid cohesion; IDA:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
15P0CL83    205   ST3L1_HUMAN STAG3-like protein 1 OS=Homo sapi...1040.009     42.4     29     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
16Q8TDX9    2849   PK1L1_HUMAN Polycystic kidney disease protein...700.23     39.7     36     47GO:0044441; C:cilium part; ISS:BHF-UCL.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016337; P:cell-cell adhesion; NAS:UniProtKB.::GO:0003127; P:detection of nodal flow; ISS:BHF-UCL.::GO:0070986; P:left/right axis specification; ISS:BHF-UCL.
17P20930    4061   FILA_HUMAN Filaggrin OS=Homo sapiens (Human)....1087.8     34.7     20     44GO:0016023; C:cytoplasmic membrane-bounded vesicle; IDA:UniProtKB.::GO:0005882; C:intermediate filament; NAS:UniProtKB.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005198; F:structural molecule activity; NAS:UniProtKB.
GO:0030216; P:keratinocyte differentiation; TAS:BHF-UCL.
18P51612    930   XPC_MOUSE DNA repair protein complementing XP...952     36.2     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0031573; P:intra-S DNA damage checkpoint; IGI:MGI.::GO:0010224; P:response to UV-B; IMP:MGI.
19Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...742.4     36.2     26     47GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
20P26359    993   MSH3_SCHPO DNA mismatch repair protein msh3 O...912.6     35.8     35     49GO:0032302; C:MutSbeta complex; ISS:RefGenome.::GO:0000228; C:nuclear chromosome; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; ISS:RefGenome.::GO:0032135; F:DNA insertion or deletion binding; ISS:PomBase.::GO:0008094; F:DNA-dependent ATPase activity; ISS:RefGenome.::GO:0000406; F:double-strand/single-strand DNA junction binding; ISS:PomBase.
GO:0043570; P:maintenance of DNA repeat elements; IMP:PomBase.::GO:0000710; P:meiotic mismatch repair; ISS:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.::GO:0000735; P:removal of nonhomologous ends; ISS:RefGenome.
21Q2JRR7    460   PCXA_SYNJA Proton extrusion protein PcxA OS=Y...933.2     35.4     28     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0015992; P:proton transport; IEA:UniProtKB-KW.
22Q02597    3163   POLG_TUMVQ Genome polyprotein OS=Turnip mosai...1173.6     35.4     30     47GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0018144; P:RNA-protein covalent cross-linking; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.
23P89509    3164   POLG_TUMVJ Genome polyprotein OS=Turnip mosai...1175.5     35     30     47GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0018144; P:RNA-protein covalent cross-linking; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.
24Q14549    363   GBX1_HUMAN Homeobox protein GBX-1 OS=Homo sap...1317.7     33.9     20     43GO:0000228; C:nuclear chromosome; NAS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
25Q8C551    337   R51A1_MOUSE RAD51-associated protein 1 OS=Mus...877.8     33.9     26     49GO:0005634; C:nucleus; IDA:MGI.
GO:0003690; F:double-stranded DNA binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0003697; F:single-stranded DNA binding; ISS:UniProtKB.
GO:0006310; P:DNA recombination; IPI:MGI.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
26A2R156    285   PXR1_ASPNC Protein pxr1 OS=Aspergillus niger ...538.8     33.5     34     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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