Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List


UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIL019W
Length:
346
Number of sequences:
5887
Description:
YIL019W FAF1 SGDID:S000001281, Chr IX from 315093-316133, Genome Release 64-1-1, Verified ORF, "Protein required for pre-rRNA processing and 40S ribosomal subunit assembly"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40546    346   FAF1_YEAST Protein FAF1 OS=Saccharomyces cere...3460     694     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
2Q10183    259   YAW8_SCHPO Uncharacterized protein C3F10.08c ...1340.000001     53.1     34     50GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
3A9ET18    140   NUSB_SORC5 N utilization substance protein B ...1090.39     34.7     27     44
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
4Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...509     32.3     28     52GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 4 1 - 4
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::