Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR214C-B
Length:
1793
Number of sequences:
5887
Description:
YHR214C-B YHR214C-B SGDID:S000003534, Chr VIII from 547929-543964,549346-547931, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0CX76    440   YM12A_YEAST Transposon Ty1-ML2 Gag polyprotei...4730     861     90     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
62P0CX75    440   YL13A_YEAST Transposon Ty1-LR3 Gag polyprotei...4730     861     90     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
63P0CX74    440   YJ11A_YEAST Transposon Ty1-JR1 Gag polyprotei...4730     861     90     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
64O74302    440   YD13A_YEAST Transposon Ty1-DR4 Gag polyprotei...4730     860     90     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
65P08405    440   TY1A_YEASX Transposon TyH3 Gag polyprotein OS...4730     858     90     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
66P0CX73    440   YP11A_YEAST Transposon Ty1-PL Gag polyprotein...4730     857     90     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
67P0CX72    440   YL12A_YEAST Transposon Ty1-LR2 Gag polyprotei...4730     857     90     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68P0CX71    440   YE11A_YEAST Transposon Ty1-ER1 Gag polyprotei...4730     857     90     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69P0CX70    440   YD15A_YEAST Transposon Ty1-DR6 Gag polyprotei...4730     857     90     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4730     851     89     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71P0CX58    440   YP12A_YEAST Transposon Ty1-PR1 Gag polyprotei...4730     847     89     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72P0CX57    440   YA11A_YEAST Transposon Ty1-A Gag polyprotein ...4730     847     89     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
73Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4730     847     89     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4730     842     89     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4730     740     79     82GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
76Q03964    440   YD17A_YEAST Transposon Ty1-DR2 Gag polyprotei...4730     664     71     78GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77Q04215    440   YM13A_YEAST Transposon Ty1-MR1 Gag polyprotei...4730     661     71     78GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78Q12266    440   YB11A_YEAST Transposon Ty1-BL Gag polyprotein...4730     657     71     77GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
79Q99303    438   YD23A_YEAST Transposon Ty2-DR3 Gag polyprotei...4732e-123     400     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80P0C2J6    438   YL22A_YEAST Transposon Ty2-LR2 Gag polyprotei...4735e-123     399     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
81Q12260    438   YB21A_YEAST Transposon Ty2-B Gag polyprotein ...4738e-123     399     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82Q03483    438   YD22A_YEAST Transposon Ty2-DR2 Gag polyprotei...4731e-122     398     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
83Q12293    438   YO22A_YEAST Transposon Ty2-OR2 Gag polyprotei...4737e-122     396     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
84P25383    438   YC21A_YEAST Transposon Ty2-C Gag polyprotein ...4737e-122     396     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
85P0C2J4    438   YL21A_YEAST Transposon Ty2-LR1 Gag polyprotei...4742e-121     395     47     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
86P0CX62    438   YG22A_YEAST Transposon Ty2-GR2 Gag polyprotei...4732e-121     395     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
87P0CX61    438   YF21A_YEAST Transposon Ty2-F Gag polyprotein ...4732e-121     395     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88P0C2J2    438   YG21A_YEAST Transposon Ty2-GR1 Gag polyprotei...4743e-121     394     47     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
89Q12439    438   YO21A_YEAST Transposon Ty2-OR1 Gag polyprotei...4736e-121     393     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
90Q12392    438   YD21A_YEAST Transposon Ty2-DR1 Gag polyprotei...4752e-120     392     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91P0C2J7    1802   YH41B_YEAST Transposon Ty4-H Gag-Pol polyprot...2958e-32     140     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
records
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