Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR200W
Length:
268
Number of sequences:
5887
Description:
YHR200W RPN10 SGDID:S000001243, Chr VIII from 499079-499885, Genome Release 64-1-1, Verified ORF, "Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome; N-terminus plays a role in maintaining the structural integrity of the RP; binds selectively to polyubiquitin chains; homolog of the mammalian S5a protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38886    268   RPN10_YEAST 26S proteasome regulatory subunit...2680     549     100     100GO:0008540; C:proteasome regulatory particle, base subcomplex; IDA:SGD.
GO:0031593; F:polyubiquitin binding; IDA:SGD.::GO:0005198; F:structural molecule activity; IMP:SGD.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
2O94444    243   RPN10_SCHPO 26S proteasome regulatory subunit...2617e-71     224     46     64GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:PomBase.
GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
3Q553E0    349   PSMD4_DICDI 26S proteasome non-ATPase regulat...2362e-70     226     51     67GO:0005634; C:nucleus; ISS:dictyBase.::GO:0000502; C:proteasome complex; ISS:dictyBase.
GO:0004175; F:endopeptidase activity; ISS:dictyBase.
GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:dictyBase.
4P55036    377   PSMD4_HUMAN 26S proteasome non-ATPase regulat...2363e-67     219     50     66GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000502; C:proteasome complex; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0000209; P:protein polyubiquitination; TAS:Reactome.::GO:0042981; P:regulation of apoptotic process; TAS:Reactome.::GO:0006521; P:regulation of cellular amino acid metabolic process; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
5Q58DA0    382   PSMD4_BOVIN 26S proteasome non-ATPase regulat...2363e-67     219     50     66GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
6O35226    376   PSMD4_MOUSE 26S proteasome non-ATPase regulat...2364e-67     219     50     66GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
7P55034    386   PSMD4_ARATH 26S proteasome non-ATPase regulat...2461e-66     218     48     68GO:0005829; C:cytosol; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0005634; C:nucleus; TAS:TAIR.::GO:0000502; C:proteasome complex; IDA:TAIR.
GO:0001653; F:peptide receptor activity; IDA:TAIR.
GO:0010150; P:leaf senescence; IMP:TAIR.::GO:0009555; P:pollen development; IMP:TAIR.::GO:0048528; P:post-embryonic root development; IMP:TAIR.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:TAIR.::GO:0043248; P:proteasome assembly; IMP:TAIR.::GO:0010029; P:regulation of seed germination; IMP:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IMP:TAIR.::GO:0009733; P:response to auxin stimulus; IMP:TAIR.::GO:0009735; P:response to cytokinin stimulus; IEP:TAIR.::GO:0006974; P:response to DNA damage stimulus; IMP:TAIR.::GO:0009408; P:response to heat; IMP:TAIR.::GO:0051788; P:response to misfolded protein; IMP:TAIR.::GO:0009651; P:response to salt stress; IMP:TAIR.::GO:0009744; P:response to sucrose stimulus; IMP:TAIR.::GO:0048767; P:root hair elongation; IMP:TAIR.::GO:0048455; P:stamen formation; IMP:TAIR.
8O17453    420   PSMD4_SCHMA 26S proteasome non-ATPase regulat...2441e-60     203     45     63GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
9P55035    396   PSMD4_DROME 26S proteasome non-ATPase regulat...2441e-53     184     43     62GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:FlyBase.
GO:0004175; F:endopeptidase activity; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007059; P:chromosome segregation; IMP:FlyBase.::GO:0006508; P:proteolysis; IDA:FlyBase.::GO:0006974; P:response to DNA damage stimulus; IMP:FlyBase.
10A2A3N6    862   PIPSL_HUMAN Putative PIP5K1A and PSMD4-like p...2342e-53     190     46     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016307; F:phosphatidylinositol phosphate kinase activity; IEA:InterPro.
11Q13888    395   TF2H2_HUMAN General transcription factor IIH ...1570.018     39.7     23     38GO:0005675; C:holo TFIIH complex; IDA:UniProtKB.
GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:ProtInc.::GO:0008135; F:translation factor activity, nucleic acid binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0002031; P:G-protein coupled receptor internalization; IMP:UniProtKB.::GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0009411; P:response to UV; TAS:ProtInc.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
12A0JN27    396   TF2H2_RAT General transcription factor IIH su...1570.035     38.9     22     38GO:0005675; C:holo TFIIH complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
13Q2TBV5    395   TF2H2_BOVIN General transcription factor IIH ...1830.038     38.9     23     39GO:0005675; C:holo TFIIH complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
14Q6P1K8    395   T2H2L_HUMAN General transcription factor IIH ...1570.045     38.5     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q9JIB4    396   TF2H2_MOUSE General transcription factor IIH ...1570.057     38.1     22     38GO:0005675; C:holo TFIIH complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
16P0C0G1    266   DHPS_STRP1 Dihydropteroate synthase OS=Strept...864.4     32     31     49
GO:0004156; F:dihydropteroate synthase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0046656; P:folic acid biosynthetic process; IEA:UniProtKB-KW.::GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
17P0DB09    266   DHPS_STRPQ Dihydropteroate synthase OS=Strept...866.7     31.6     30     49
GO:0004156; F:dihydropteroate synthase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0046656; P:folic acid biosynthetic process; IEA:UniProtKB-KW.::GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
18Q8P152    266   DHPS_STRP8 Dihydropteroate synthase OS=Strept...866.7     31.6     30     49
GO:0004156; F:dihydropteroate synthase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0046656; P:folic acid biosynthetic process; IEA:UniProtKB-KW.::GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
19P0DB08    266   DHPS_STRP3 Dihydropteroate synthase OS=Strept...866.7     31.6     30     49
GO:0004156; F:dihydropteroate synthase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0046656; P:folic acid biosynthetic process; IEA:UniProtKB-KW.::GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
records
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