Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR170W
Length:
518
Number of sequences:
5887
Description:
YHR170W NMD3 SGDID:S000001213, Chr VIII from 443828-445384, Genome Release 64-1-1, Verified ORF, "Protein involved in nuclear export of the large ribosomal subunit; acts as a Crm1p-dependent adapter protein for export of nascent ribosomal subunits through the nuclear pore complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38861    518   NMD3_YEAST 60S ribosomal export protein NMD3 ...5180     1084     100     100GO:0005829; C:cytosol; IDA:SGD.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0043023; F:ribosomal large subunit binding; IDA:SGD.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.
2Q09817    498   NMD3_SCHPO 60S ribosomal export protein nmd3 ...5030     579     54     75GO:0005829; C:cytosol; IDA:PomBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
3Q55BF2    530   NMD3_DICDI 60S ribosomal export protein NMD3 ...5105e-168     493     47     67GO:0005829; C:cytosol; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0043023; F:ribosomal large subunit binding; ISS:dictyBase.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0000055; P:ribosomal large subunit export from nucleus; ISS:dictyBase.
4Q96D46    503   NMD3_HUMAN 60S ribosomal export protein NMD3 ...5068e-157     463     44     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
5Q5RC82    503   NMD3_PONAB 60S ribosomal export protein NMD3 ...5063e-156     462     44     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
6Q99L48    503   NMD3_MOUSE 60S ribosomal export protein NMD3 ...5063e-156     462     43     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
7Q6P2Z6    504   NMD3_XENTR 60S ribosomal export protein NMD3 ...4975e-155     459     46     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
8Q08DS5    503   NMD3_BOVIN 60S ribosomal export protein NMD3 ...5115e-151     448     43     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
9Q6GNS3    504   NMD3_XENLA 60S ribosomal export protein NMD3 ...5081e-144     432     45     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
10Q5BLF0    505   NMD3_DANRE 60S ribosomal export protein NMD3 ...5117e-138     415     43     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
11A6PVC2    850   TTLL8_HUMAN Protein monoglycylase TTLL8 OS=Ho...890.74     36.2     28     38GO:0035085; C:cilium axoneme; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0070736; F:protein-glycine ligase activity, initiating; ISS:UniProtKB.::GO:0004835; F:tubulin-tyrosine ligase activity; IEA:InterPro.
GO:0018094; P:protein polyglycylation; ISS:UniProtKB.
12P77882    1053   RPOC_LISGR DNA-directed RNA polymerase subuni...891.6     35.4     34     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
13P34318    465   SET3_CAEEL SET domain-containing protein 3 OS...515.9     33.1     31     51
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
14Q9Z207    1171   DIAP3_MOUSE Protein diaphanous homolog 3 OS=M...1396.2     33.5     24     42
GO:0003779; F:actin binding; IEA:InterPro.::GO:0017048; F:Rho GTPase binding; IEA:InterPro.
GO:0030036; P:actin cytoskeleton organization; IEA:InterPro.
records
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