Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR167W
Length:
261
Number of sequences:
5887
Description:
YHR167W THP2 SGDID:S000001210, Chr VIII from 439342-440127, Genome Release 64-1-1, Verified ORF, "Subunit of the THO complex, which connects transcription elongation and mitotic recombination, and of the TREX complex, which is recruited to activated genes and couples transcription to mRNA export; involved in telomere maintenance"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1O13539    261   THP2_YEAST THO complex subunit THP2 OS=Saccha...2610     534     100     100GO:0000446; C:nucleoplasmic THO complex; IMP:SGD.::GO:0000445; C:THO complex part of transcription export complex; IPI:SGD.
GO:0003676; F:nucleic acid binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006310; P:DNA recombination; IMP:SGD.::GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.
2P39111    118   VATF_YEAST V-type proton ATPase subunit F OS=...620.11     35.4     32     55GO:0000329; C:fungal-type vacuole membrane; TAS:SGD.::GO:0000221; C:vacuolar proton-transporting V-type ATPase, V1 domain; TAS:SGD.
GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; TAS:SGD.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0007035; P:vacuolar acidification; TAS:SGD.
3Q6PAV2    1057   HERC4_MOUSE Probable E3 ubiquitin-protein lig...1410.39     35.8     27     43GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; TAS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IBA:RefGenome.::GO:0007283; P:spermatogenesis; IMP:UniProtKB.
4Q5PQN1    1057   HERC4_RAT Probable E3 ubiquitin-protein ligas...1410.89     34.7     26     43GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; IBA:RefGenome.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IBA:RefGenome.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.
5Q1WT99    458   MURD_LACS1 UDP-N-acetylmuramoylalanine--D-glu...472.3     33.1     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004326; F:tetrahydrofolylpolyglutamate synthase activity; IEA:InterPro.::GO:0008764; F:UDP-N-acetylmuramoylalanine-D-glutamate ligase activity; IEA:EC.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-KW.::GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
6B3WEJ5    344   IDI2_LACCB Isopentenyl-diphosphate delta-isom...1602.6     32.7     19     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0010181; F:FMN binding; IEA:InterPro.::GO:0004452; F:isopentenyl-diphosphate delta-isomerase activity; IEA:EC.::GO:0016491; F:oxidoreductase activity; IEA:InterPro.
GO:0008299; P:isoprenoid biosynthetic process; IEA:UniProtKB-KW.
7Q038V3    344   IDI2_LACC3 Isopentenyl-diphosphate delta-isom...1602.8     32.7     19     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0010181; F:FMN binding; IEA:InterPro.::GO:0004452; F:isopentenyl-diphosphate delta-isomerase activity; IEA:EC.::GO:0016491; F:oxidoreductase activity; IEA:InterPro.
GO:0008299; P:isoprenoid biosynthetic process; IEA:UniProtKB-KW.
8P46191    488   SYK_MYCHP Lysine--tRNA ligase OS=PG21). GN=ly...694.2     32.3     33     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004824; F:lysine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006430; P:lysyl-tRNA aminoacylation; IEA:InterPro.
9Q5GLZ8    1057   HERC4_HUMAN Probable E3 ubiquitin-protein lig...1415.5     32.3     26     41GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; IBA:RefGenome.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IBA:RefGenome.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.
records
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