Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR154W
Length:
1070
Number of sequences:
5887
Description:
YHR154W RTT107 SGDID:S000001197, Chr VIII from 402966-406178, Genome Release 64-1-1, Verified ORF, "Protein implicated in Mms22-dependent DNA repair during S phase; involved in recruiting the SMC5/6 complex to double-strand breaks; DNA damage induces phosphorylation by Mec1p at one or more SQ/TQ motifs; interacts with Mms22p and Slx4p; has four BRCT domains; has a role in regulation of Ty1 transposition"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38850    1070   RT107_YEAST Regulator of Ty1 transposition pr...10700     2204     100     100GO:0035361; C:Cul8-RING ubiquitin ligase complex; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0010526; P:negative regulation of transposition, RNA-mediated; IMP:SGD.
2Q10337    878   BRC1_SCHPO BRCT-containing protein 1 OS=Schiz...2041.3     37     19     42GO:0005634; C:nucleus; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051276; P:chromosome organization; IGI:PomBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; IMP:PomBase.::GO:0000018; P:regulation of DNA recombination; IMP:PomBase.
3O04251    1329   Y4211_ARATH BRCT domain-containing protein At...1310.0000002     59.3     32     50GO:0005622; C:intracellular; IEA:InterPro.
4P32372    648   RAD4_SCHPO S-M checkpoint control protein rad...1940.000009     53.5     26     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0031261; C:DNA replication preinitiation complex; ISS:PomBase.::GO:0043596; C:nuclear replication fork; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000077; P:DNA damage checkpoint; IMP:PomBase.::GO:0071163; P:DNA replication preinitiation complex assembly; IMP:PomBase.::GO:0006270; P:DNA-dependent DNA replication initiation; ISS:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IMP:PomBase.
5Q800K6    1513   TOB1A_XENLA DNA topoisomerase 2-binding prote...590.5     38.1     32     56GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0019900; F:kinase binding; IPI:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000076; P:DNA replication checkpoint; IMP:UniProtKB.::GO:0071163; P:DNA replication preinitiation complex assembly; IMP:UniProtKB.::GO:0006270; P:DNA-dependent DNA replication initiation; IMP:UniProtKB.::GO:0071165; P:GINS complex assembly; IMP:UniProtKB.::GO:0035563; P:positive regulation of chromatin binding; IMP:UniProtKB.::GO:0033138; P:positive regulation of peptidyl-serine phosphorylation; IDA:UniProtKB.::GO:0045860; P:positive regulation of protein kinase activity; IDA:UniProtKB.::GO:0071168; P:protein localization to chromatin; IMP:UniProtKB.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:UniProtKB.
6Q5XIY8    943   PAXI1_DANRE PAX-interacting protein 1 OS=Dani...1360.19     39.7     25     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q6ZQF0    1515   TOPB1_MOUSE DNA topoisomerase 2-binding prote...880.42     38.5     28     47GO:0000794; C:condensed nuclear chromosome; IDA:MGI.::GO:0001673; C:male germ cell nucleus; IDA:MGI.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
8Q6ZW49    1069   PAXI1_HUMAN PAX-interacting protein 1 OS=Homo...940.46     38.1     29     44GO:0035097; C:histone methyltransferase complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030330; P:DNA damage response, signal transduction by p53 class mediator; IMP:UniProtKB.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0051568; P:histone H3-K4 methylation; IDA:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; ISS:UniProtKB.::GO:0000416; P:positive regulation of histone H3-K36 methylation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:0045830; P:positive regulation of isotype switching; ISS:UniProtKB.::GO:0031398; P:positive regulation of protein ubiquitination; ISS:UniProtKB.::GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IMP:UniProtKB.::GO:0010212; P:response to ionizing radiation; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q03254    732   FCP1_YEAST RNA polymerase II subunit A C-term...910.57     37.7     32     48GO:0005634; C:nucleus; IPI:SGD.
GO:0004722; F:protein serine/threonine phosphatase activity; IDA:SGD.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.
10Q7ZZY3    1513   TOB1B_XENLA DNA topoisomerase 2-binding prote...1350.77     37.7     26     39GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
11Q90WJ3    1256   PAXI1_XENLA PAX-interacting protein 1 OS=Xeno...970.8     37.7     28     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q92547    1522   TOPB1_HUMAN DNA topoisomerase 2-binding prote...1100.98     37.4     26     42GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0016605; C:PML body; IDA:UniProtKB.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; TAS:ProtInc.
GO:0006281; P:DNA repair; NAS:UniProtKB.::GO:0010212; P:response to ionizing radiation; IDA:UniProtKB.
13O54762    413   ALLT_SPETR Alpha-1-antitrypsin-like protein G...1441.1     36.6     21     43GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0004867; F:serine-type endopeptidase inhibitor activity; IEA:UniProtKB-KW.
14A0JNA8    984   PAXI1_BOVIN PAX-interacting protein 1 OS=Bos ...2022.2     36.2     22     35GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q42533    280   BCCP1_ARATH Biotin carboxyl carrier protein o...663.1     35     30     53GO:0009317; C:acetyl-CoA carboxylase complex; IEA:InterPro.::GO:0009941; C:chloroplast envelope; IDA:TAIR.::GO:0009570; C:chloroplast stroma; IDA:TAIR.
GO:0003989; F:acetyl-CoA carboxylase activity; IDA:TAIR.
GO:0006633; P:fatty acid biosynthetic process; TAS:TAIR.
16Q9LUJ5    293   EBP2_ARATH Probable rRNA-processing protein E...2063.7     34.7     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
17Q6NZQ4    1056   PAXI1_MOUSE PAX-interacting protein 1 OS=Mus ...944.4     35     27     44GO:0035097; C:histone methyltransferase complex; IDA:MGI.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0060612; P:adipose tissue development; IMP:UniProtKB.::GO:0060717; P:chorion development; IMP:UniProtKB.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0043542; P:endothelial cell migration; IMP:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; IMP:UniProtKB.::GO:0000416; P:positive regulation of histone H3-K36 methylation; IMP:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:UniProtKB.::GO:0045830; P:positive regulation of isotype switching; IMP:UniProtKB.::GO:0031398; P:positive regulation of protein ubiquitination; IMP:UniProtKB.::GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001570; P:vasculogenesis; IMP:UniProtKB.
18Q8P274    185   RRF_STRP8 Ribosome-recycling factor OS=Strept...845.4     33.9     33     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006412; P:translation; IEA:UniProtKB-KW.
19A2BWN6    631   DXS_PROM5 1-deoxy-D-xylulose-5-phosphate synt...1187.2     34.3     27     42
GO:0008661; F:1-deoxy-D-xylulose-5-phosphate synthase activity; IEA:EC.
GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.::GO:0009228; P:thiamine biosynthetic process; IEA:UniProtKB-KW.
20P57857    643   SYT_PASMU Threonine--tRNA ligase OS=Pasteurel...817.3     34.3     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004829; F:threonine-tRNA ligase activity; IEA:EC.
GO:0006435; P:threonyl-tRNA aminoacylation; IEA:InterPro.
records
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