Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR148W
Length:
183
Number of sequences:
5887
Description:
YHR148W IMP3 SGDID:S000001191, Chr VIII from 393534-394085, Genome Release 64-1-1, Verified ORF, "Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P32899    183   IMP3_YEAST U3 small nucleolar ribonucleoprote...1835e-134     379     100     100GO:0034457; C:Mpp10 complex; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0030515; F:snoRNA binding; IDA:SGD.
GO:0006364; P:rRNA processing; TAS:SGD.
2O13835    183   IMP3_SCHPO U3 small nucleolar ribonucleoprote...1828e-83     249     63     82GO:0005730; C:nucleolus; IDA:PomBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
3Q01688    169   YS4L_PNECA Putative 37S ribosomal protein S4-...1681e-70     218     61     79GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
4Q921Y2    184   IMP3_MOUSE U3 small nucleolar ribonucleoprote...1831e-65     206     54     74GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IGI:MGI.
5Q3T0M3    184   IMP3_BOVIN U3 small nucleolar ribonucleoprote...1831e-65     206     54     74GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
6Q9NV31    184   IMP3_HUMAN U3 small nucleolar ribonucleoprote...1831e-64     203     54     74GO:0005730; C:nucleolus; IDA:HGNC.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:HGNC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
7O01513    183   YS4L_CAEEL Putative 40S ribosomal protein S4-...1821e-52     172     45     64GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
8A1RWT8    172   RS4_THEPD 30S ribosomal protein S4P OS=Thermo...1488e-16     75.5     30     55GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
9A3DMQ4    168   RS4_STAMF 30S ribosomal protein S4P OS=Staphy...1500.000000000000006     72.8     29     53GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
10A2BK77    176   RS4_HYPBU 30S ribosomal protein S4P OS=Hypert...1590.00000000000006     70.1     29     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
11O28000    172   RS4_ARCFU 30S ribosomal protein S4P OS=9628 /...1530.00000000000009     69.7     26     52GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
12Q6KZP7    183   RS4_PICTO 30S ribosomal protein S4P OS=100828...1450.0000000000002     68.6     27     56GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
13Q9YB58    171   RS4_AERPE 30S ribosomal protein S4P OS=100138...1480.0000000000006     67.4     26     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
14A8MDS5    181   RS4_CALMQ 30S ribosomal protein S4P OS=/ IC-1...1490.000000000006     64.3     27     52GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
15Q8TVC0    186   RS4_METKA 30S ribosomal protein S4P OS=100938...1490.00000000002     63.2     26     54GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
16A5UN53    178   RS4_METS3 30S ribosomal protein S4P OS=Methan...1540.00000000002     62.8     27     53GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
17Q5JJF2    180   RS4_PYRKO 30S ribosomal protein S4P OS=(Therm...930.00000000002     62.8     35     56GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
18C5A251    180   RS4_THEGJ 30S ribosomal protein S4P OS=Thermo...930.00000000002     62.8     34     57GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
19O26142    171   RS4_METTH 30S ribosomal protein S4P OS=thermo...1650.00000000003     62.4     27     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
20Q96YV8    177   RS4_SULTO 30S ribosomal protein S4P OS=Sulfol...1330.0000000001     60.8     29     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
21Q0W1V5    205   RS4_UNCMA 30S ribosomal protein S4P OS=Uncult...1640.0000000001     60.8     27     51GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
22P39467    176   RS4_SULAC 30S ribosomal protein S4P OS=NBRC 1...1330.0000000002     60.1     29     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
23Q74NF7    180   RS4_NANEQ 30S ribosomal protein S4P OS=Nanoar...1380.0000000008     58.2     26     53GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
24A8A8W3    166   RS4_IGNH4 30S ribosomal protein S4P OS=Ignico...1440.000000002     57     24     51GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
25Q12ZR5    184   RS4_METBU 30S ribosomal protein S4P OS=Methan...1520.000000002     57     28     48GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
26Q8ZTV1    159   RS4_PYRAE 30S ribosomal protein S4P OS=/ NBRC...1420.000000005     55.8     30     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
27B1Y9B8    159   RS4_THENV 30S ribosomal protein S4P OS=Thermo...1010.00000002     54.3     33     51GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
28A1RT03    159   RS4_PYRIL 30S ribosomal protein S4P OS=Pyroba...1090.00000002     54.3     32     51GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
29A3MUS9    159   RS4_PYRCJ 30S ribosomal protein S4P OS=Pyroba...1400.00000002     53.9     29     49GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
30O59306    180   RS4_PYRHO 30S ribosomal protein S4P OS=NBRC 1...870.00000002     54.3     33     57GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
31A0B9L2    183   RS4_METTP 30S ribosomal protein S4P OS=thermo...1490.00000002     54.3     25     48GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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