Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR148W
Length:
183
Number of sequences:
5887
Description:
YHR148W IMP3 SGDID:S000001191, Chr VIII from 393534-394085, Genome Release 64-1-1, Verified ORF, "Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q2NFZ4    182   RS4_METST 30S ribosomal protein S4P OS=Methan...1500.000002     48.9     25     49GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
62Q09757    191   RS9A_SCHPO 40S ribosomal protein S9-A OS=Schi...1290.000002     49.3     25     48GO:0022627; C:cytosolic small ribosomal subunit; ISS:PomBase.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.
63A6VGQ7    178   RS4_METM7 30S ribosomal protein S4P OS=Methan...1460.000003     48.9     24     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
64A4YIN4    180   RS4_METS5 30S ribosomal protein S4P OS=Metall...1490.000004     48.5     28     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
65Q9FLF0    197   RS92_ARATH 40S ribosomal protein S9-2 OS=Arab...1070.000005     48.1     31     49GO:0005829; C:cytosol; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
66P29314    194   RS9_RAT 40S ribosomal protein S9 OS=Rattus no...1320.000006     48.1     24     48GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
67A9L913    194   RS9_PAPAN 40S ribosomal protein S9 OS=Papio a...1320.000006     48.1     24     48GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
68Q6ZWN5    194   RS9_MOUSE 40S ribosomal protein S9 OS=Mus mus...1320.000006     48.1     24     48
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
69P46781    194   RS9_HUMAN 40S ribosomal protein S9 OS=Homo sa...1320.000006     48.1     24     48GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0045182; F:translation regulator activity; IMP:UniProtKB.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
70A6QLG5    194   RS9_BOVIN 40S ribosomal protein S9 OS=Bos tau...1320.000006     48.1     24     48
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
71Q8TRR1    218   RS4_METAC 30S ribosomal protein S4P OS=C2A). ...1530.000008     48.1     24     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
72Q20228    189   RS9_CAEEL 40S ribosomal protein S9 OS=Caenorh...1330.000008     47.8     26     52GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006412; P:translation; IEA:InterPro.
73O15612    185   RS9_ENTHI 40S ribosomal protein S9 OS=Entamoe...1660.00001     47.4     20     49GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
74A6UPW5    178   RS4_METVS 30S ribosomal protein S4P OS=Methan...1460.00001     47     23     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
75Q18G54    175   RS4_HALWD 30S ribosomal protein S4P OS=Haloqu...1500.00005     45.1     26     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
76Q3IQT8    174   RS4_NATPD 30S ribosomal protein S4P OS=Natron...1500.00006     45.1     26     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
77P55935    195   RS9_DROME 40S ribosomal protein S9 OS=Drosoph...1320.00006     45.1     23     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0000022; P:mitotic spindle elongation; IMP:FlyBase.::GO:0006412; P:translation; IEA:InterPro.
78A7IAH7    185   RS4_METB6 30S ribosomal protein S4P OS=Methan...720.00008     44.7     29     54GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
79A9A436    201   RS4_NITMS 30S ribosomal protein S4P OS=Nitros...1480.0002     43.9     22     51GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
80P95987    181   RS4_SULSO 30S ribosomal protein S4P OS=P2). G...1470.0003     43.1     22     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
81Q3ST14    205   RS4_NITWN 30S ribosomal protein S4 OS=Nitroba...1010.0006     42.4     33     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
82Q00862    171   RS4_HALMA 30S ribosomal protein S4P OS=B-1809...1490.0008     42     24     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
83B6JDU6    205   RS4_OLICO 30S ribosomal protein S4 OS=Oligotr...1010.001     42     32     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
84Q46GC8    216   RS4_METBF 30S ribosomal protein S4P OS=Methan...1520.002     41.6     22     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
85Q8PV18    219   RS4_METMA 30S ribosomal protein S4P OS=JCM 11...1530.002     41.6     22     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
86B8GEG7    181   RS4_METPE 30S ribosomal protein S4P OS=Methan...890.003     40.4     24     52GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
87Q1QMT5    205   RS4_NITHX 30S ribosomal protein S4 OS=Nitroba...680.003     40.8     34     53GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
88Q2FT97    181   RS4_METHJ 30S ribosomal protein S4P OS=Methan...960.004     40     26     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
89A7IMS4    205   RS4_XANP2 30S ribosomal protein S4 OS=Xanthob...460.004     40.4     39     59GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
90Q5FQ27    205   RS4_GLUOX 30S ribosomal protein S4 OS=Glucono...610.005     40     38     54GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
91B3Q7H1    205   RS4_RHOPT 30S ribosomal protein S4 OS=Rhodops...700.011     38.9     31     53GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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