UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YHR148W

Length:

183

Number of sequences:

5887

Description:

YHR148W IMP3 SGDID:S000001191, Chr VIII from 393534-394085, Genome Release 64-1-1, Verified ORF, "Component of the SSU processome, which is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
121	Q8E2M6	203	RS4_STRA3 30S ribosomal protein S4 OS=Strepto...	65	0.19	35	34	54	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
122	Q3JYG8	203	RS4_STRA1 30S ribosomal protein S4 OS=Strepto...	65	0.19	35	34	54	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
123	Q13A88	205	RS4_RHOPS 30S ribosomal protein S4 OS=Rhodops...	70	0.19	35	30	51	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
124	A2SSV9	181	RS4_METLZ 30S ribosomal protein S4P OS=Methan...	137	0.2	35	22	45	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
125	Q6EW46	201	RR4_NYMAL 30S ribosomal protein S4, chloropla...	39	0.21	35	41	59	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
126	Q9A5D9	205	RS4_CAUCR 30S ribosomal protein S4 OS=Cauloba...	44	0.23	35	36	55	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
127	B8H053	205	RS4_CAUCN 30S ribosomal protein S4 OS=Cauloba...	44	0.23	35	36	55	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
128	Q01WB9	210	RS4_SOLUE 30S ribosomal protein S4 OS=Solibac...	169	0.25	35	24	43	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
129	O73556	2179	POLG_HPE2W Genome polyprotein OS=Human parech...	133	0.3	35.4	25	42	GO:0044162; C:host cell cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.::GO:0019015; C:viral genome; IEA:InterPro.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0005216; F:ion channel activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
									GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0018144; P:RNA-protein covalent cross-linking; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.
130	Q1IX98	206	RS4_DEIGD 30S ribosomal protein S4 OS=Deinoco...	105	0.3	34.7	24	47	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
131	B9KPH3	206	RS4_RHOSK 30S ribosomal protein S4 OS=Rhodoba...	93	0.31	34.7	28	41	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
132	Q3J446	206	RS4_RHOS4 30S ribosomal protein S4 OS=158). G...	93	0.31	34.7	28	41	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
133	A3PIA3	206	RS4_RHOS1 30S ribosomal protein S4 OS=Rhodoba...	93	0.31	34.7	28	41	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
134	Q19VA6	203	RR4_CHLAT 30S ribosomal protein S4, chloropla...	39	0.33	34.7	38	62	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
135	Q2ITR6	205	RS4_RHOP2 30S ribosomal protein S4 OS=Rhodops...	70	0.34	34.3	29	51	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
136	O66484	211	RS4_AQUAE 30S ribosomal protein S4 OS=Aquifex...	42	0.34	34.7	40	60	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
137	A0RY02	205	RS4_CENSY 30S ribosomal protein S4P OS=Cenarc...	142	0.34	34.3	20	42	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
138	Q9FT08	202	RR4_BUCRO 30S ribosomal protein S4, chloropla...	62	0.4	34.3	32	58	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
139	B1M7L0	205	RS4_METRJ 30S ribosomal protein S4 OS=2831). ...	46	0.5	33.9	35	54	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
140	Q9RSJ7	205	RS4_DEIRA 30S ribosomal protein S4 OS=LMG 405...	105	0.5	33.9	24	46	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
141	P27418	205	RR4_EUGGR 30S ribosomal protein S4, chloropla...	40	0.52	33.9	40	60	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
142	Q49CB8	197	RR4_CUSSA Plastid 30S ribosomal protein S4 OS...	39	0.52	33.9	44	56	GO:0009536; C:plastid; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
143	A4WUP0	206	RS4_RHOS5 30S ribosomal protein S4 OS=Rhodoba...	93	0.53	33.9	27	41	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
144	A1BA23	206	RS4_PARDP 30S ribosomal protein S4 OS=Paracoc...	46	0.57	33.9	35	52	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
145	Q89ID3	205	RS4_BRAJA 30S ribosomal protein S4 OS=Bradyrh...	44	0.58	33.9	34	55	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
146	A3CRA2	203	RS4_STRSV 30S ribosomal protein S4 OS=Strepto...	46	0.6	33.5	35	61	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
147	A8AZY6	203	RS4_STRGC 30S ribosomal protein S4 OS=V288). ...	46	0.61	33.5	35	61	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
148	C1CNV7	203	RS4_STRZT 30S ribosomal protein S4 OS=Strepto...	46	0.62	33.5	35	61	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
149	C1CHZ1	203	RS4_STRZP 30S ribosomal protein S4 OS=Strepto...	46	0.62	33.5	35	61	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
150	C1CBQ4	203	RS4_STRZJ 30S ribosomal protein S4 OS=Strepto...	46	0.62	33.5	35	61	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.
151	P66566	203	RS4_STRR6 30S ribosomal protein S4 OS=Strepto...	46	0.62	33.5	35	61	GO:0015935; C:small ribosomal subunit; IEA:InterPro.
									GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; IEA:InterPro.

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