Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR143W-A
Length:
70
Number of sequences:
5887
Description:
YHR143W-A RPC10 SGDID:S000001185, Chr VIII from 387233-387445, Genome Release 64-1-1, Verified ORF, "RNA polymerase subunit ABC10-alpha, found in RNA polymerase complexes I, II, and III"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40422    70   RPAB4_YEAST DNA-directed RNA polymerases I, I...702e-44     142     100     100GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IC:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006360; P:transcription from RNA polymerase I promoter; IMP:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006383; P:transcription from RNA polymerase III promoter; IMP:SGD.
2P48011    63   RPAB4_SCHPO DNA-directed RNA polymerases I, I...620.00000000000003     65.9     44     69GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IGI:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; IGI:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0006360; P:transcription from RNA polymerase I promoter; IGI:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IGI:PomBase.::GO:0006383; P:transcription from RNA polymerase III promoter; IGI:PomBase.
3Q63871    58   RPAB4_MOUSE DNA-directed RNA polymerases I, I...560.00000000007     56.6     41     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
4P53803    58   RPAB4_HUMAN DNA-directed RNA polymerases I, I...490.0000000002     55.8     45     67GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; TAS:ProtInc.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006356; P:regulation of transcription from RNA polymerase I promoter; TAS:ProtInc.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
5Q3ZBC0    58   RPAB4_BOVIN DNA-directed RNA polymerases I, I...490.0000000002     55.8     45     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
6Q54R66    46   RPAB4_DICDI DNA-directed RNA polymerases I, I...420.0000000002     55.1     50     71GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase.
7Q3IMF0    44   RPOP_NATPD DNA-directed RNA polymerase subuni...430.0001     39.7     37     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
8Q9HSG9    44   RPOP_HALSA DNA-directed RNA polymerase subuni...360.0005     37.7     42     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
9B0R2Y0    44   RPOP_HALS3 DNA-directed RNA polymerase subuni...360.0005     37.7     42     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
10Q5V1M2    44   RPOP_HALMA DNA-directed RNA polymerase subuni...350.0006     37.7     43     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
11Q18KN3    44   RPOP_HALWD DNA-directed RNA polymerase subuni...380.0007     37.4     39     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
12B9LTN3    44   RPOP_HALLT DNA-directed RNA polymerase subuni...340.0007     37.4     44     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
13Q8TYC4    51   RPOP_METKA DNA-directed RNA polymerase subuni...440.005     35     36     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
14Q0W2Y5    45   RPOP_UNCMA DNA-directed RNA polymerase subuni...350.011     33.9     43     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
15P61934    45   RPOP_METMA DNA-directed RNA polymerase subuni...440.035     32.3     34     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
16Q469M0    45   RPOP_METBF DNA-directed RNA polymerase subuni...440.035     32.3     34     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
17P61933    45   RPOP_METAC DNA-directed RNA polymerase subuni...440.035     32.3     34     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
18A0B8W0    45   RPOP_METTP DNA-directed RNA polymerase subuni...440.039     32.3     39     55
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
19O74105    49   RPOP_PYRHO DNA-directed RNA polymerase subuni...360.04     32.3     50     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
20Q9V201    49   RPOP_PYRAB DNA-directed RNA polymerase subuni...360.11     31.2     47     58
GO:0003677; F:DNA binding; IEA:HAMAP.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:HAMAP.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
21B6YTZ7    49   RPOP_THEON DNA-directed RNA polymerase subuni...360.13     30.8     44     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
22Q5JDM8    49   RPOP_PYRKO DNA-directed RNA polymerase subuni...400.17     30.8     43     55
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
23Q12ZB4    46   RPOP_METBU DNA-directed RNA polymerase subuni...370.29     30     35     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
24Q8TZI3    49   RPOP_PYRFU DNA-directed RNA polymerase subuni...360.33     29.6     47     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
25O30180    46   RPOP_ARCFU DNA-directed RNA polymerase subuni...350.39     29.6     34     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
26Q4JAE8    48   RPOP_SULAC DNA-directed RNA polymerase subuni...361.3     28.1     39     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
27Q5BE04    595   HST4_EMENI NAD-dependent protein deacetylase ...504.8     28.5     30     44
GO:0070403; F:NAD+ binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006476; P:protein deacetylation; IEA:InterPro.
records
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