Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR141C
Length:
106
Number of sequences:
5887
Description:
YHR141C RPL42B SGDID:S000001183, Chr VIII from 382306-381990,382751-382748, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, identical to Rpl42Ap and has similarity to rat L44; required for propagation of the killer toxin-encoding M1 double-stranded RNA satellite of the L-A double-stranded RNA virus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P83882    106   RL36A_MOUSE 60S ribosomal protein L36a OS=Mus...1087e-49     157     73     86GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
32P83881    106   RL36A_HUMAN 60S ribosomal protein L36a OS=Hom...1087e-49     157     73     86GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.
GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
33D0VWQ4    106   RL36A_CANFA 60S ribosomal protein L36a OS=Can...1087e-49     157     73     86GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
34Q3SZ59    106   RL36A_BOVIN 60S ribosomal protein L36a OS=Bos...1087e-49     157     73     86GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
35Q969Q0    106   RL36L_HUMAN 60S ribosomal protein L36a-like O...1081e-48     156     72     86GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
36Q5R9D2    106   RL36L_PONAB 60S ribosomal protein L36a-like O...1086e-48     155     71     86GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
37Q55CW5    103   RL36A_DICDI 60S ribosomal protein L36a OS=Dic...1065e-47     152     75     82GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; ISS:dictyBase.
GO:0006412; P:translation; ISS:dictyBase.
38Q9NB33    104   RL44_AEDTR 60S ribosomal protein L44 OS=trise...1062e-45     148     71     80GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
39P49213    99   RL44_CHLRE 60S ribosomal protein L44 OS=Chlam...992e-44     145     73     86
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.::GO:0046898; P:response to cycloheximide; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
40A9L948    106   RL36A_PAPAN 60S ribosomal protein L36a OS=Pap...1082e-44     145     69     81GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
41P17843    106   RL44_TRYBB 60S ribosomal protein L44 OS=Trypa...986e-39     131     65     78GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
42O97231    104   RL44_PLAF7 60S ribosomal protein L44 OS=Plasm...1041e-36     125     69     81GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
43Q8SR18    104   RL44_ENCCU 60S ribosomal protein L44 OS=Encep...1062e-33     117     58     72GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
44Q22X38    109   RL36A_TETTS 60S ribosomal protein L36a OS=Tet...891e-27     103     67     76GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
45Q9YF00    95   RL44_AERPE 50S ribosomal protein L44E OS=1001...890.00000000000001     68.9     45     56GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
46Q9HIX1    93   RL44_THEAC 50S ribosomal protein L44E OS=NBRC...920.000000000002     62.8     39     54GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
47O27365    92   RL44_METTH 50S ribosomal protein L44E OS=ther...760.000000002     54.3     41     61GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
48P54027    94   RL44_METJA 50S ribosomal protein L44E OS=JCM ...760.00000001     52.4     37     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
49Q8U475    94   RL44_PYRFU 50S ribosomal protein L44E OS=Pyro...930.00000004     50.8     38     52GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
50O59603    94   RL44_PYRHO 50S ribosomal protein L44E OS=NBRC...910.0000002     48.9     40     52GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
51Q9UXZ2    94   RL44_PYRAB 50S ribosomal protein L44E OS=Pyro...760.0000002     48.9     37     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
52O28936    93   RL44_ARCFU 50S ribosomal protein L44E OS=9628...900.001     38.1     37     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
53Q2UHL4    367   PGLR1_ASPOR Endopolygalacturonase I OS=Asperg...489.1     28.9     40     56GO:0005576; C:extracellular region; IDA:UniProtKB.
GO:0047911; F:galacturan 1,4-alpha-galacturonidase activity; IDA:UniProtKB.::GO:0004650; F:polygalacturonase activity; IDA:UniProtKB.
GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0045490; P:pectin catabolic process; IDA:UniProtKB.
54B8N8M2    367   PGLR1_ASPFN Probable endopolygalacturonase I ...489.1     28.9     40     56GO:0005576; C:extracellular region; ISS:UniProtKB.
GO:0047911; F:galacturan 1,4-alpha-galacturonidase activity; ISS:UniProtKB.::GO:0004650; F:polygalacturonase activity; ISS:UniProtKB.
GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0045490; P:pectin catabolic process; ISS:UniProtKB.
records
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