Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR121W
Length:
187
Number of sequences:
5887
Description:
YHR121W LSM12 SGDID:S000001163, Chr VIII from 352756-353319, Genome Release 64-1-1, Verified ORF, "Protein of unknown function that may function in RNA processing; interacts with Pbp1p and Pbp4p and associates with ribosomes; contains an RNA-binding LSM domain and an AD domain; GFP-fusion protein is induced by the DNA-damaging agent MMS"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38828    187   LSM12_YEAST Protein LSM12 OS=Saccharomyces ce...1872e-132     376     100     100GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
2Q6PBA2    196   LS12A_DANRE Protein LSM12 homolog A OS=Danio ...1780.000000000000003     74.3     28     52
3Q6NSN1    196   LS12B_DANRE Protein LSM12 homolog B OS=Danio ...1780.00000000000002     71.6     28     51
4Q5RAT5    195   LSM12_PONAB Protein LSM12 homolog OS=Pongo ab...1780.00000000000006     70.5     26     52
5Q9D0R8    195   LSM12_MOUSE Protein LSM12 homolog OS=Mus musc...1780.00000000000006     70.5     26     52
6Q3MHD2    195   LSM12_HUMAN Protein LSM12 homolog OS=Homo sap...1780.00000000000006     70.5     26     52
7Q0VCF9    195   LSM12_BOVIN Protein LSM12 homolog OS=Bos taur...1780.00000000000006     70.5     26     52
8Q5ZML5    194   LSM12_CHICK Protein LSM12 homolog OS=Gallus g...1780.0000000000003     68.6     25     52
9Q6GP89    194   LSM12_XENLA Protein LSM12 homolog OS=Xenopus ...1840.000000000002     66.2     26     50
10Q6P833    194   LSM12_XENTR Protein LSM12 homolog OS=Xenopus ...1820.000000000009     63.9     24     49
11Q9VYR0    217   LS12A_DROME Protein LSM12 homolog A OS=Drosop...1710.000007     48.1     23     51
12Q6BIH7    257   MED6_DEBHA Mediator of RNA polymerase II tran...1002.1     32.3     26     48GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
13Q54TC2    379   ADHX_DICDI Alcohol dehydrogenase class-3 OS=D...305     31.2     47     73GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004024; F:alcohol dehydrogenase activity, zinc-dependent; ISS:dictyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0051903; F:S-(hydroxymethyl)glutathione dehydrogenase activity; IEA:EC.::GO:0008270; F:zinc ion binding; ISS:dictyBase.
GO:0006069; P:ethanol oxidation; IEA:InterPro.
records
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