Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR120W
Length:
959
Number of sequences:
5887
Description:
YHR120W MSH1 SGDID:S000001162, Chr VIII from 349574-352453, Genome Release 64-1-1, Verified ORF, "DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA, has ATPase activity and binds to DNA mismatches; has homology to E. coli MutS; transcription is induced during meiosis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631P0CO92    1191   MSH3_CRYNJ DNA mismatch repair protein MSH3 O...2190.001     46.6     23     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
632P0CO93    1191   MSH3_CRYNB DNA mismatch repair protein MSH3 O...2190.001     46.6     23     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
633Q9VUM0    1190   MSH6_DROME Probable DNA mismatch repair prote...1570.39     38.5     25     42GO:0032301; C:MutSalpha complex; IBA:RefGenome.::GO:0000228; C:nuclear chromosome; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000400; F:four-way junction DNA binding; IBA:RefGenome.::GO:0032137; F:guanine/thymine mispair binding; IBA:RefGenome.::GO:0032138; F:single base insertion or deletion binding; IBA:RefGenome.
GO:0008630; P:DNA damage response, signal transduction resulting in induction of apoptosis; IBA:RefGenome.::GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IMP:FlyBase.::GO:0045910; P:negative regulation of DNA recombination; IBA:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0009411; P:response to UV; IBA:RefGenome.
634O74502    1254   MSH6_SCHPO DNA mismatch repair protein msh6 O...4101e-18     95.5     26     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0032301; C:MutSalpha complex; ISS:RefGenome.::GO:0000228; C:nuclear chromosome; ISS:RefGenome.
GO:0005524; F:ATP binding; ISS:PomBase.::GO:0003684; F:damaged DNA binding; ISS:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; ISS:RefGenome.::GO:0000400; F:four-way junction DNA binding; ISS:RefGenome.::GO:0032137; F:guanine/thymine mispair binding; ISS:PomBase.::GO:0032138; F:single base insertion or deletion binding; ISS:RefGenome.
GO:0043570; P:maintenance of DNA repeat elements; IMP:PomBase.::GO:0000710; P:meiotic mismatch repair; ISS:RefGenome.::GO:0045910; P:negative regulation of DNA recombination; ISS:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; ISS:RefGenome.::GO:0009411; P:response to UV; ISS:RefGenome.
635Q8F496    848   MUTS_LEPIN DNA mismatch repair protein MutS O...3670.0000000000004     77.4     26     40GO:0032300; C:mismatch repair complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0006298; P:mismatch repair; IBA:RefGenome.
636P61669    848   MUTS_LEPIC DNA mismatch repair protein MutS O...3670.0000000000004     77.4     26     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
637Q759V4    1032   MSH3_ASHGO DNA mismatch repair protein MSH3 O...1120.0003     48.9     29     47GO:0032302; C:MutSbeta complex; IBA:RefGenome.::GO:0000228; C:nuclear chromosome; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000406; F:double-strand/single-strand DNA junction binding; IBA:RefGenome.::GO:0000404; F:loop DNA binding; IBA:RefGenome.::GO:0000403; F:Y-form DNA binding; IBA:RefGenome.
GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IBA:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0000735; P:removal of nonhomologous ends; IBA:RefGenome.
638A7TTQ1    1023   MSH3_VANPO DNA mismatch repair protein MSH3 O...5952e-36     152     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
639O74773    982   MSH2_SCHPO DNA mismatch repair protein msh2 O...961.5     36.6     24     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0032301; C:MutSalpha complex; ISS:RefGenome.::GO:0032302; C:MutSbeta complex; ISS:RefGenome.::GO:0000228; C:nuclear chromosome; ISS:PomBase.
GO:0005524; F:ATP binding; ISS:PomBase.::GO:0003684; F:damaged DNA binding; ISS:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; ISS:RefGenome.::GO:0000406; F:double-strand/single-strand DNA junction binding; ISS:PomBase.::GO:0000400; F:four-way junction DNA binding; ISS:PomBase.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.::GO:0000403; F:Y-form DNA binding; ISS:PomBase.
GO:0043570; P:maintenance of DNA repeat elements; IMP:PomBase.::GO:0006311; P:meiotic gene conversion; ISS:RefGenome.::GO:0000710; P:meiotic mismatch repair; ISS:RefGenome.::GO:0045128; P:negative regulation of reciprocal meiotic recombination; ISS:RefGenome.::GO:0006301; P:postreplication repair; ISS:RefGenome.::GO:0000735; P:removal of nonhomologous ends; ISS:RefGenome.
640A4R0R0    1151   MSH3_MAGO7 DNA mismatch repair protein MSH3 O...4410.00000000000001     82.4     24     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
641Q2HFD4    1156   MSH3_CHAGB DNA mismatch repair protein MSH3 O...4370.00000000000002     82     25     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
642O04716    1324   MSH6_ARATH DNA mismatch repair protein Msh6-1...4649e-17     89.4     26     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IDA:TAIR.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; ISS:TAIR.::GO:0006290; P:pyrimidine dimer repair; IMP:TAIR.
643P25336    1018   MSH3_YEAST DNA mismatch repair protein MSH3 O...4070.00000005     60.8     23     42GO:0005737; C:cytoplasm; IDA:SGD.::GO:0032302; C:MutSbeta complex; IPI:SGD.::GO:0000228; C:nuclear chromosome; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0032135; F:DNA insertion or deletion binding; IDA:SGD.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000406; F:double-strand/single-strand DNA junction binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0000735; P:removal of nonhomologous ends; IMP:SGD.
644A6ZTR3    1018   MSH3_YEAS7 DNA mismatch repair protein MSH3 O...4070.00000005     60.8     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
645P54276    1358   MSH6_MOUSE DNA mismatch repair protein Msh6 O...4100.00000000003     71.2     24     39GO:0032301; C:MutSalpha complex; IDA:MGI.::GO:0000790; C:nuclear chromatin; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; IDA:MGI.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000400; F:four-way junction DNA binding; IBA:RefGenome.::GO:0032137; F:guanine/thymine mispair binding; IDA:MGI.
GO:0008340; P:determination of adult lifespan; IMP:MGI.::GO:0008630; P:DNA damage response, signal transduction resulting in induction of apoptosis; IMP:MGI.::GO:0045190; P:isotype switching; IMP:MGI.::GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IBA:RefGenome.::GO:0045910; P:negative regulation of DNA recombination; IMP:MGI.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0009411; P:response to UV; IMP:MGI.::GO:0016446; P:somatic hypermutation of immunoglobulin genes; IMP:MGI.
646Q7SD11    1145   MSH3_NEUCR DNA mismatch repair protein msh-3 ...4972e-17     91.7     25     42GO:0032302; C:MutSbeta complex; IBA:RefGenome.::GO:0000228; C:nuclear chromosome; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000406; F:double-strand/single-strand DNA junction binding; IBA:RefGenome.::GO:0000404; F:loop DNA binding; IBA:RefGenome.::GO:0000403; F:Y-form DNA binding; IBA:RefGenome.
GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IBA:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0000735; P:removal of nonhomologous ends; IBA:RefGenome.
647O15457    936   MSH4_HUMAN MutS protein homolog 4 OS=Homo sap...2669e-33     140     35     56GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
648P52701    1360   MSH6_HUMAN DNA mismatch repair protein Msh6 O...930.006     44.3     31     46GO:0032301; C:MutSalpha complex; IDA:HGNC.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008340; P:determination of adult lifespan; ISS:BHF-UCL.::GO:0008630; P:DNA damage response, signal transduction resulting in induction of apoptosis; ISS:BHF-UCL.::GO:0045190; P:isotype switching; ISS:BHF-UCL.::GO:0000710; P:meiotic mismatch repair; ISS:BHF-UCL.::GO:0045910; P:negative regulation of DNA recombination; IDA:BHF-UCL.::GO:0051096; P:positive regulation of helicase activity; IDA:BHF-UCL.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0009411; P:response to UV; ISS:BHF-UCL.::GO:0016446; P:somatic hypermutation of immunoglobulin genes; ISS:BHF-UCL.
649Q9QUM7    833   MSH5_MOUSE MutS protein homolog 5 OS=Mus musc...6263e-32     138     24     45GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000795; C:synaptonemal complex; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0007292; P:female gamete generation; IMP:MGI.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
650Q6MG62    831   MSH5_RAT MutS protein homolog 5 OS=Rattus nor...6424e-32     138     24     45GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
651Q99MT2    958   MSH4_MOUSE MutS protein homolog 4 OS=Mus musc...2645e-32     138     35     57GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000795; C:synaptonemal complex; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0007292; P:female gamete generation; IMP:MGI.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0001541; P:ovarian follicle development; IMP:MGI.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0007283; P:spermatogenesis; IMP:MGI.
652Q49X88    887   MUTS_STAS1 DNA mismatch repair protein MutS O...4066e-32     137     29     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
653Q4P6I8    1154   MSH3_USTMA DNA mismatch repair protein MSH3 O...5510.0000000000004     77.4     21     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
654O43196    834   MSH5_HUMAN MutS protein homolog 5 OS=Homo sap...6401e-29     130     23     45GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0007136; P:meiotic prophase II; TAS:ProtInc.::GO:0006298; P:mismatch repair; TAS:ProtInc.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
655Q03834    1242   MSH6_YEAST DNA mismatch repair protein MSH6 O...4710.0000002     58.9     22     39GO:0032301; C:MutSalpha complex; IPI:SGD.::GO:0000228; C:nuclear chromosome; IBA:RefGenome.
GO:0005524; F:ATP binding; IDA:SGD.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0000400; F:four-way junction DNA binding; IDA:SGD.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0043570; P:maintenance of DNA repeat elements; IBA:RefGenome.::GO:0000710; P:meiotic mismatch repair; IMP:SGD.::GO:0045910; P:negative regulation of DNA recombination; IBA:RefGenome.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0009411; P:response to UV; IBA:RefGenome.
656Q23405    842   HIM14_CAEEL MutS protein homolog him-14 OS=Ca...1600.011     43.5     28     48GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051026; P:chiasma assembly; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0051729; P:germline cell cycle switching, mitotic to meiotic cell cycle; IMP:WormBase.::GO:0045143; P:homologous chromosome segregation; IMP:WormBase.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0000239; P:pachytene; IMP:UniProtKB.::GO:0000712; P:resolution of meiotic recombination intermediates; IMP:UniProtKB.
657Q12175    901   MSH5_YEAST MutS protein homolog 5 OS=Saccharo...2722e-28     126     31     52GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.
658O94065    803   MSH4_CANAX MutS protein homolog 4 OS=Candida ...5576e-28     125     26     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006298; P:mismatch repair; IEA:InterPro.
659Q19272    1369   MSH5_CAEEL MutS protein homolog 5 OS=Caenorha...1970.0002     48.9     26     45GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051026; P:chiasma assembly; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0045143; P:homologous chromosome segregation; IMP:WormBase.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IMP:UniProtKB.
660P40965    878   MSH4_YEAST MutS protein homolog 4 OS=Saccharo...7351e-24     114     24     41GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.
661Q03R49    787   MUTS2_LACBA MutS2 protein OS=Lactobacillus br...3611e-24     114     26     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0045005; P:maintenance of fidelity involved in DNA-dependent DNA replication; IEA:InterPro.::GO:0006298; P:mismatch repair; IEA:InterPro.
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