Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR089C
Length:
205
Number of sequences:
5887
Description:
YHR089C GAR1 SGDID:S000001131, Chr VIII from 283298-282681, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the H/ACA snoRNP pseudouridylase complex, involved in the modification and cleavage of the 18S pre-rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q1LZB6    708   CAPR1_BOVIN Caprin-1 OS=Bos taurus (Bovine). ...490.09     37     43     51GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0017148; P:negative regulation of translation; ISS:UniProtKB.::GO:0050775; P:positive regulation of dendrite morphogenesis; ISS:UniProtKB.::GO:0061003; P:positive regulation of dendritic spine morphogenesis; ISS:UniProtKB.
32Q9JIK5    851   DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus m...620.25     35.8     52     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0043330; P:response to exogenous dsRNA; IMP:MGI.::GO:0009615; P:response to virus; IMP:MGI.
33Q5M9G3    707   CAPR1_RAT Caprin-1 OS=Rattus norvegicus (Rat)...360.25     35.8     53     58GO:0000932; C:cytoplasmic mRNA processing body; IDA:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0017148; P:negative regulation of translation; IDA:UniProtKB.::GO:0050775; P:positive regulation of dendrite morphogenesis; ISS:UniProtKB.::GO:0061003; P:positive regulation of dendritic spine morphogenesis; ISS:UniProtKB.
34Q60865    707   CAPR1_MOUSE Caprin-1 OS=Mus musculus (Mouse)....360.38     35     53     58GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0017148; P:negative regulation of translation; ISS:UniProtKB.::GO:0050775; P:positive regulation of dendrite morphogenesis; IMP:UniProtKB.::GO:0061003; P:positive regulation of dendritic spine morphogenesis; IMP:UniProtKB.
35Q14444    709   CAPR1_HUMAN Caprin-1 OS=Homo sapiens (Human)....360.45     35     53     58GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.::GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0017148; P:negative regulation of translation; ISS:UniProtKB.::GO:0050775; P:positive regulation of dendrite morphogenesis; ISS:UniProtKB.::GO:0061003; P:positive regulation of dendritic spine morphogenesis; ISS:UniProtKB.
36P11824    777   L100_ADE41 Late 100 kDa protein OS=Human aden...855.1     31.6     33     42
GO:0019060; P:intracellular transport of viral proteins in host cell; IEA:InterPro.
37Q7KTX8    2618   MED13_DROME Mediator of RNA polymerase II tra...750.72     34.3     36     41GO:0016592; C:mediator complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IDA:UniProtKB.
GO:0045165; P:cell fate commitment; IGI:FlyBase.::GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0048749; P:compound eye development; IMP:FlyBase.::GO:0009790; P:embryo development; IMP:FlyBase.::GO:0036011; P:imaginal disc-derived leg segmentation; IMP:FlyBase.::GO:0030177; P:positive regulation of Wnt receptor signaling pathway; IMP:FlyBase.::GO:0045498; P:sex comb development; IMP:FlyBase.::GO:0048190; P:wing disc dorsal/ventral pattern formation; IGI:FlyBase.
38A2AHG0    700   PRIP1_MOUSE ProSAP-interacting protein 1 OS=M...600.74     34.3     33     45GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.::GO:0014069; C:postsynaptic density; ISS:UniProtKB.::GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-KW.
39Q3B8Q1    782   DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus ...810.79     34.3     46     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
40O60299    673   PRIP1_HUMAN ProSAP-interacting protein 1 OS=H...890.86     33.9     31     40GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.::GO:0014069; C:postsynaptic density; ISS:UniProtKB.::GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-KW.
41Q5VUA4    2279   ZN318_HUMAN Zinc finger protein 318 OS=Homo s...611.2     33.9     33     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q3TD16    648   K226L_MOUSE Uncharacterized protein KIAA0226-...821.9     33.1     30     43
43B4M693    1138   EIF3A_DROVI Eukaryotic translation initiation...862.2     32.7     35     38GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
GO:0006446; P:regulation of translational initiation; ISS:UniProtKB.
44O26972    92   Y886_METTH Uncharacterized protein MTH_886 OS...663     30.4     27     50GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
45Q8K1Q4    703   PRIP1_RAT ProSAP-interacting protein 1 OS=Rat...603.7     32     33     42GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.::GO:0014069; C:postsynaptic density; IDA:UniProtKB.::GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-KW.
GO:0030165; F:PDZ domain binding; IPI:UniProtKB.::GO:0043621; F:protein self-association; IPI:UniProtKB.
GO:0051260; P:protein homooligomerization; IPI:UniProtKB.
46B2UAA3    964   IF2_RALPJ Translation initiation factor IF-2 ...515.4     31.6     37     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
47Q46J13    1183   IF2_PROMT Translation initiation factor IF-2 ...1046.3     31.6     31     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
48Q6CK58    652   MSC3_KLULA Meiotic sister-chromatid recombina...557     31.2     42     44GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
49A9RZ57    373   CSPLD_PHYPA CASP-like protein PHYPADRAFT_1619...477.4     30.8     43     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
50Q09249    1032   YQ53_CAEEL Uncharacterized protein C16C10.3 O...348     31.2     56     65
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
records
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