Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR089C
Length:
205
Number of sequences:
5887
Description:
YHR089C GAR1 SGDID:S000001131, Chr VIII from 283298-282681, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the H/ACA snoRNP pseudouridylase complex, involved in the modification and cleavage of the 18S pre-rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P28007    205   GAR1_YEAST H/ACA ribonucleoprotein complex su...2059e-137     388     100     100GO:0031429; C:box H/ACA snoRNP complex; IPI:UniProtKB.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; TAS:SGD.::GO:0031120; P:snRNA pseudouridine synthesis; IDA:SGD.
2Q6CJ45    219   GAR1_KLULA H/ACA ribonucleoprotein complex su...1307e-70     218     85     88GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
3Q6FSB0    222   GAR1_CANGA H/ACA ribonucleoprotein complex su...1461e-62     200     84     88GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
4Q757V8    212   GAR1_ASHGO H/ACA ribonucleoprotein complex su...1053e-60     194     84     94GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
5A3GHP2    202   GAR1_PICST H/ACA ribonucleoprotein complex su...1104e-59     190     84     89GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
6Q6BVF9    215   GAR1_DEBHA H/ACA ribonucleoprotein complex su...1102e-57     186     83     87GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
7Q2HH48    210   GAR1_CHAGB H/ACA ribonucleoprotein complex su...1277e-48     162     68     79GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
8Q06975    194   GAR1_SCHPO H/ACA ribonucleoprotein complex su...1041e-47     160     64     87GO:0031429; C:box H/ACA snoRNP complex; IGI:PomBase.
GO:0034513; F:box H/ACA snoRNA binding; ISS:PomBase.::GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0019843; F:rRNA binding; IC:PomBase.
GO:0031118; P:rRNA pseudouridine synthesis; IGI:PomBase.::GO:0031120; P:snRNA pseudouridine synthesis; IGI:PomBase.
9Q1E6M1    203   GAR1_COCIM H/ACA ribonucleoprotein complex su...1128e-47     159     70     80GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
10A6SDR8    221   GAR1_BOTFB H/ACA ribonucleoprotein complex su...924e-44     152     75     86GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
11P0CN78    203   GAR1_CRYNJ H/ACA ribonucleoprotein complex su...1002e-43     150     68     84GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
12P0CN79    203   GAR1_CRYNB H/ACA ribonucleoprotein complex su...1002e-43     150     68     84GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
13Q4P5P0    227   GAR1_USTMA H/ACA ribonucleoprotein complex su...972e-42     148     69     85GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
14A1CVY3    209   GAR1_NEOFI H/ACA ribonucleoprotein complex su...914e-41     144     70     84GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
15Q8VZT0    202   NLAL1_ARATH Putative H/ACA ribonucleoprotein ...974e-37     134     61     76GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.::GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
16Q5RJV1    218   GAR1_XENTR H/ACA ribonucleoprotein complex su...1007e-37     133     57     79GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
17Q9FK53    189   NLAL2_ARATH H/ACA ribonucleoprotein complex s...1069e-37     132     56     75GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.::GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
18Q9NY12    217   GAR1_HUMAN H/ACA ribonucleoprotein complex su...985e-35     128     57     77GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.::GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.
GO:0005261; F:cation channel activity; TAS:ProtInc.::GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
19Q9CY66    231   GAR1_MOUSE H/ACA ribonucleoprotein complex su...982e-34     127     57     77GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.::GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
20Q7ZVE0    226   GAR1_DANRE H/ACA ribonucleoprotein complex su...972e-34     127     56     77GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
21Q6AYA1    226   GAR1_RAT H/ACA ribonucleoprotein complex subu...983e-34     127     56     77GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.::GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
22Q61B10    246   GAR1_CAEBR Probable H/ACA ribonucleoprotein c...971e-30     117     56     71GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
23Q7KVQ0    237   GAR1_DROME Probable H/ACA ribonucleoprotein c...1131e-28     112     49     65GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
24Q9TYK1    244   GAR1_CAEEL Probable H/ACA ribonucleoprotein c...971e-27     110     52     70GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
25Q54XE6    230   GAR1_DICDI Probable H/ACA ribonucleoprotein c...914e-23     97.4     48     69GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
26O96722    195   GAR1_ENCCU H/ACA ribonucleoprotein complex su...870.000000000000002     75.5     41     62GO:0031429; C:box H/ACA snoRNP complex; IEA:InterPro.
GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0030515; F:snoRNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0031120; P:snRNA pseudouridine synthesis; IEA:InterPro.
27P35207    1287   SKI2_YEAST Antiviral helicase SKI2 OS=Sacchar...640.008     40.4     42     52GO:0055087; C:Ski complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IMP:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
28B4GDX4    1173   EIF3A_DROPE Eukaryotic translation initiation...720.11     37     44     49GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
GO:0006446; P:regulation of translational initiation; ISS:UniProtKB.
29A2AIV2    1811   VIR_MOUSE Protein virilizer homolog OS=Mus mu...750.043     38.1     37     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
30Q69YN4    1812   VIR_HUMAN Protein virilizer homolog OS=Homo s...750.043     38.1     37     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
31Q1LZB6    708   CAPR1_BOVIN Caprin-1 OS=Bos taurus (Bovine). ...490.09     37     43     51GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0017148; P:negative regulation of translation; ISS:UniProtKB.::GO:0050775; P:positive regulation of dendrite morphogenesis; ISS:UniProtKB.::GO:0061003; P:positive regulation of dendritic spine morphogenesis; ISS:UniProtKB.
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