Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR086W
Length:
53
Number of sequences:
5887
Description:
YHR086W-A YHR086W-A SGDID:S000028552, Chr VIII from 280231-280392, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; identified by fungal homology and RT-PCR"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q54BM2    565   PAP1A_DICDI Polyadenylate-binding protein 1-A...4320.000000004     62.8     23     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:dictyBase.
GO:0006378; P:mRNA polyadenylation; ISS:dictyBase.
62P27476    414   NSR1_YEAST Nuclear localization sequence-bind...1810.00000003     59.3     23     48GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; TAS:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0003697; F:single-stranded DNA binding; IDA:SGD.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0000028; P:ribosomal small subunit assembly; TAS:SGD.::GO:0006364; P:rRNA processing; TAS:SGD.
63Q4WK03    753   PABP_ASPFU Polyadenylate-binding protein, cyt...2360.004     43.5     21     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
64Q2UK72    765   PABP_ASPOR Polyadenylate-binding protein, cyt...361.4     35.4     44     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
65Q08935    273   ROC1_NICSY 29 kDa ribonucleoprotein A, chloro...870.0000002     56.2     32     61GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
66A5DW14    661   PABP_LODEL Polyadenylate-binding protein, cyt...790.0002     48.1     32     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
67P49313    279   ROC1_NICPL 30 kDa ribonucleoprotein, chloropl...890.0000001     56.6     33     61GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
68A4QUF0    762   PABP_MAGO7 Polyadenylate-binding protein, cyt...1840.00002     51.2     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0043581; P:mycelium development; IEP:PAMGO_MGG.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
69O17310    324   SXL_MUSDO Sex-lethal homolog OS=Musca domesti...770.073     38.9     29     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70Q0CR95    753   PABP_ASPTN Polyadenylate-binding protein, cyt...2400.006     43.1     20     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
71A1D4K4    751   PABP_NEOFI Polyadenylate-binding protein, cyt...2340.002     44.3     21     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
72Q7SZT7    400   ELAV4_XENLA ELAV-like protein 4 OS=Xenopus la...2970.00000002     60.1     25     43GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
73Q6DRG1    402   RBM42_DANRE RNA-binding protein 42 OS=Danio r...770.00000002     60.1     40     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0002088; P:lens development in camera-type eye; IMP:ZFIN.
74A4QNI8    400   ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tr...2970.00000002     60.1     25     43GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
75Q4P8R9    651   PABP_USTMA Polyadenylate-binding protein, cyt...3490.0002     47.4     21     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
76P15771    694   NUCL_CHICK Nucleolin OS=Gallus gallus (Chicke...3720.0000003     56.6     25     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77P26378    380   ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapie...830.025     40.8     29     47
GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; TAS:ProtInc.
78Q61701    385   ELAV4_MOUSE ELAV-like protein 4 OS=Mus muscul...830.025     40.8     29     47
GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
79Q66KL9    392   RBM42_XENTR RNA-binding protein 42 OS=Xenopus...770.00000003     59.7     39     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80O97018    307   SXL_CHRRU Sex-lethal homolog OS=Chrysomya ruf...770.032     40     30     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
81P42696    430   RBM34_HUMAN RNA-binding protein 34 OS=Homo sa...1880.00000003     59.7     27     47GO:0005730; C:nucleolus; IDA:HPA.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82Q74ZS6    585   PABP_ASHGO Polyadenylate-binding protein, cyt...1410.0002     47.4     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
83O09032    373   ELAV4_RAT ELAV-like protein 4 OS=Rattus norve...830.025     40.8     29     47
GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
84Q9LNV5    481   C3H4_ARATH Zinc finger CCCH domain-containing...1360.00000004     59.3     29     46GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.
85O64380    660   PABP3_ARATH Polyadenylate-binding protein 3 O...3560.00007     49.3     20     39
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IGI:TAIR.
86Q8T6B9    637   PUF68_DROME Poly(U)-binding-splicing factor h...1870.008     42.7     20     44GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; ISS:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase.
GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0007282; P:cystoblast division; IMP:FlyBase.::GO:0006376; P:mRNA splice site selection; IMP:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0001558; P:regulation of cell growth; IMP:FlyBase.
87Q5M9F1    428   RBM34_RAT RNA-binding protein 34 OS=Rattus no...1900.00000005     58.9     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88Q6Z358    486   C3H49_ORYSJ Zinc finger CCCH domain-containin...1340.00000006     58.9     32     46
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
89Q6Z1C0    572   NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp...941.8     35     27     49
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
90A2VDB3    392   RBM42_XENLA RNA-binding protein 42 OS=Xenopus...1000.00000008     58.2     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91Q91903    389   ELAV2_XENLA ELAV-like protein 2 OS=Xenopus la...740.008     42.4     32     54GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017131; F:uridine-rich cytoplasmic polyadenylylation element binding; IDA:UniProtKB.
GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB.
records
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