Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR086W
Length:
53
Number of sequences:
5887
Description:
YHR086W-A YHR086W-A SGDID:S000028552, Chr VIII from 280231-280392, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; identified by fungal homology and RT-PCR"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451Q5ZI72    301   HNRDL_CHICK Heterogeneous nuclear ribonucleop...535.3     33.1     26     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
452P53316    781   YG5B_YEAST Uncharacterized RNA-binding protei...730.016     41.6     29     55GO:0010494; C:cytoplasmic stress granule; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
453Q4R813    394   RMXL2_MACFA RNA-binding motif protein, X-link...820.016     41.2     29     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
454Q96T37    977   RBM15_HUMAN Putative RNA-binding protein 15 O...850.27     37.7     31     49GO:0005634; C:nucleus; IDA:HPA.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
455Q9JJ54    353   HNRPD_RAT Heterogeneous nuclear ribonucleopro...1820.017     41.2     21     38GO:0005829; C:cytosol; IDA:RGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB.
GO:0003729; F:mRNA binding; TAS:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0042162; F:telomeric DNA binding; ISS:UniProtKB.
GO:0048255; P:mRNA stabilization; IDA:RGD.::GO:0000291; P:nuclear-transcribed mRNA catabolic process, exonucleolytic; TAS:RGD.::GO:0006913; P:nucleocytoplasmic transport; TAS:RGD.
456Q9HCJ3    691   RAVR2_HUMAN Ribonucleoprotein PTB-binding 2 O...590.017     41.6     36     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
457Q8WXF0    261   SRS12_HUMAN Serine/arginine-rich splicing fac...680.017     40.8     31     53GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0050733; F:RS domain binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB.
GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:UniProtKB.::GO:0016482; P:cytoplasmic transport; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
458Q19706    256   EIF3G_CAEEL Eukaryotic translation initiation...830.018     40.8     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
459Q9P3U1    464   YKX5_SCHPO Uncharacterized RNA-binding protei...3130.1     38.9     21     37GO:0005829; C:cytosol; IDA:PomBase.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; ISS:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; ISS:PomBase.
460Q44560    102   RBPA_NOSS1 Putative RNA-binding protein rbpA ...381.3     33.1     37     63
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
461Q66J99    190   RBM18_XENLA Probable RNA-binding protein 18 O...1270.019     40     26     48
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
462Q6ZI17    848   OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativ...1010.019     41.6     27     46
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
463Q177H0    159   NCBP2_AEDAE Nuclear cap-binding protein subun...790.89     34.7     25     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
464Q0P4R6    534   RBM46_XENTR Probable RNA-binding protein 46 O...1450.035     40.4     28     41
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
465Q9LVX1    908   C3H41_ARATH Zinc finger CCCH domain-containin...570.02     41.6     33     53
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
466P25299    296   RNA15_YEAST mRNA 3'-end-processing protein RN...770.02     40.8     30     53GO:0005849; C:mRNA cleavage factor complex; IPI:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0046982; F:protein heterodimerization activity; IPI:SGD.
GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
467Q4R2Z0    485   RBM46_MACFA Probable RNA-binding protein 46 O...800.064     39.7     29     50
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
468A8WLV5    261   EIF3G_CAEBR Probable eukaryotic translation i...770.021     40.4     29     51
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
469Q54KR9    234   NCBP2_DICDI Nuclear cap-binding protein subun...960.021     40.4     27     42GO:0005846; C:nuclear cap binding complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000339; F:RNA cap binding; ISS:dictyBase.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
470Q5R9H4    587   A1CF_PONAB APOBEC1 complementation factor OS=...781.7     35     28     50GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB.
471Q39244    250   RU1A_ARATH U1 small nuclear ribonucleoprotein...810.23     37.4     31     49GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005685; C:U1 snRNP; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.::GO:0009651; P:response to salt stress; IGI:TAIR.
472B7P877    152   NCBP2_IXOSC Nuclear cap-binding protein subun...790.023     39.3     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
473Q293V6    154   NCBP2_DROPS Nuclear cap-binding protein subun...820.19     36.6     28     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
474B4GLK8    154   NCBP2_DROPE Nuclear cap-binding protein subun...820.19     36.6     28     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
475Q18409    179   RSP6_CAEEL Probable splicing factor, arginine...730.024     39.7     37     49GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0008406; P:gonad development; IGI:UniProtKB.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040026; P:positive regulation of vulval development; IMP:WormBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:WormBase.::GO:0031554; P:regulation of transcription termination, DNA-dependent; IGI:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB.
476O04425    747   FCA_ARATH Flowering time control protein FCA ...620.15     38.5     31     50GO:0000785; C:chromatin; TAS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031048; P:chromatin silencing by small RNA; IMP:TAIR.::GO:0009790; P:embryo development; IGI:TAIR.::GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0009909; P:regulation of flower development; IMP:TAIR.
477P38741    713   RIM4_YEAST Meiotic activator RIM4 OS=Saccharo...790.025     41.2     30     51GO:0005737; C:cytoplasm; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IMP:SGD.
GO:0006279; P:premeiotic DNA replication; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IGI:SGD.
478Q6PG31    283   RNPS1_DANRE RNA-binding protein with serine-r...680.42     36.6     28     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
479P0C8Z4    992   RMXL3_PANTR RNA-binding motif protein, X-link...730.027     41.2     32     51
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
480Q9VVE5    369   MSIR6_DROME RNA-binding protein Musashi homol...1750.028     40.4     20     37GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005844; C:polysome; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; ISS:UniProtKB.
GO:0048864; P:stem cell development; ISS:UniProtKB.
481Q3SWU3    322   HNRDL_RAT Heterogeneous nuclear ribonucleopro...1762     34.7     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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