Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR066W
Length:
453
Number of sequences:
5887
Description:
YHR066W SSF1 SGDID:S000001108, Chr VIII from 229335-230696, Genome Release 64-1-1, Verified ORF, "Constituent of 66S pre-ribosomal particles, required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38789    453   SSF1_YEAST Ribosome biogenesis protein SSF1 O...4530     922     100     100GO:0005730; C:nucleolus; IDA:SGD.
GO:0019843; F:rRNA binding; IPI:SGD.
GO:0000747; P:conjugation with cellular fusion; IGI:SGD.::GO:0008361; P:regulation of cell size; IMP:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
2Q12153    453   SSF2_YEAST Ribosome biogenesis protein SSF2 O...4530     798     94     96GO:0005730; C:nucleolus; IDA:SGD.
GO:0019843; F:rRNA binding; IPI:SGD.
GO:0000747; P:conjugation with cellular fusion; IGI:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
3O14206    389   YDD3_SCHPO Brix domain-containing protein C1B...4378e-87     277     39     60GO:0005730; C:nucleolus; IDA:PomBase.
GO:0019843; F:rRNA binding; ISS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
4Q91YU8    470   SSF1_MOUSE Suppressor of SWI4 1 homolog OS=Mu...4596e-68     230     33     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
5Q9NQ55    473   SSF1_HUMAN Suppressor of SWI4 1 homolog OS=Ho...4336e-62     214     35     54GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:MGI.
GO:0008380; P:RNA splicing; TAS:ProtInc.
6Q5REM3    473   SSF1_PONAB Suppressor of SWI4 1 homolog OS=Po...4152e-61     213     35     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
7Q54N44    426   PPAN_DICDI Peter Pan-like protein OS=Dictyost...3801e-53     191     33     55
8Q9ASU7    345   PPAN_ARATH Peter Pan-like protein OS=Arabidop...3354e-49     176     33     54
9Q9VDE5    460   PPAN_DROME Protein Peter pan OS=Drosophila me...4038e-48     176     33     53
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007444; P:imaginal disc development; IMP:UniProtKB.::GO:0002164; P:larval development; IMP:UniProtKB.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.
10Q9HGL6    295   BRX1_SCHPO Ribosome biogenesis protein brx1 O...730.32     36.6     26     49GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
11Q6IQU6    330   RPF1_DANRE Ribosome production factor 1 OS=Da...481.5     34.7     38     54GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
12Q6FNN7    288   IMP4_CANGA U3 small nucleolar ribonucleoprote...1550.24     37     26     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
13Q5RJS9    345   RPF1_RAT Ribosome production factor 1 OS=Ratt...363     33.9     42     61GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
14Q7TND5    349   RPF1_MOUSE Ribosome production factor 1 OS=Mu...481.1     35     38     54GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
15Q5R631    349   RPF1_PONAB Ribosome production factor 1 OS=Po...481.1     35     38     54GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
16Q9H9Y2    349   RPF1_HUMAN Ribosome production factor 1 OS=Ho...1131.1     35     28     43GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
17Q8AVP1    343   RPF1_XENLA Ribosome production factor 1 OS=Xe...1131.4     34.7     26     42GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
18Q9VKB4    394   RPF1_DROME Probable ribosome production facto...531.5     34.7     38     53GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
19Q6DJS0    819   N4BP1_XENTR NEDD4-binding protein 1 OS=Xenopu...882.2     34.7     27     40GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0016605; C:PML body; ISS:UniProtKB.
GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB.
20Q96P66    508   GP101_HUMAN Probable G-protein coupled recept...672.7     34.3     31     55GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004930; F:G-protein coupled receptor activity; IEA:UniProtKB-KW.
21P54073    384   YUY1_CAEEL Brix domain-containing protein F44...1093.1     33.9     25     44
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
22Q4QQT6    352   BRX1_RAT Ribosome biogenesis protein BRX1 hom...793.7     33.5     33     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
23Q8TDN6    353   BRX1_HUMAN Ribosome biogenesis protein BRX1 h...604     33.5     35     52GO:0005730; C:nucleolus; IDA:HPA.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
24Q3SZZ0    353   BRX1_BOVIN Ribosome biogenesis protein BRX1 h...604.5     33.1     35     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
25Q6DN52    191   CBPL_DICDI Calcium-binding protein L OS=Dicty...1134.7     32.7     24     48
GO:0005509; F:calcium ion binding; ISS:dictyBase.
26Q7ZXG4    848   N4BP1_XENLA NEDD4-binding protein 1 OS=Xenopu...547.7     32.7     28     48GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0016605; C:PML body; ISS:UniProtKB.
GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB.
27Q9DCA5    353   BRX1_MOUSE Ribosome biogenesis protein BRX1 h...608.5     32.3     33     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
28A4D1E1    1349   Z804B_HUMAN Zinc finger protein 804B OS=Homo ...438.9     32.7     47     63GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0008270; F:zinc ion binding; IEA:InterPro.
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