Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR052W
Length:
376
Number of sequences:
5887
Description:
YHR052W CIC1 SGDID:S000001094, Chr VIII from 210848-211978, Genome Release 64-1-1, Verified ORF, "Essential protein that interacts with proteasome components and has a potential role in proteasome substrate specificity; also copurifies with 66S pre-ribosomal particles"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38779    376   CIC1_YEAST Proteasome-interacting protein CIC...3760     753     100     100GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.::GO:0000502; C:proteasome complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0030674; F:protein binding, bridging; IMP:SGD.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0030163; P:protein catabolic process; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IPI:SGD.::GO:0006412; P:translation; IEA:InterPro.
2Q9UT32    373   RL1DB_SCHPO Putative ribosome biogenesis prot...2840.0000000007     63.5     26     48GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
3Q5RCE6    490   RL1D1_PONAB Ribosomal L1 domain-containing pr...1670.000006     51.6     27     49GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
4O76021    490   RL1D1_HUMAN Ribosomal L1 domain-containing pr...1670.000006     51.6     27     49GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0032880; P:regulation of protein localization; IMP:MGI.::GO:0006412; P:translation; IEA:InterPro.
5A4FV97    482   RL1D1_BOVIN Ribosomal L1 domain-containing pr...2570.000008     51.2     27     45GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
6P36144    274   RL1D1_YEAST Ribosome biogenesis protein UTP30...2360.012     40.8     23     42GO:0030686; C:90S preribosome; IDA:SGD.::GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042274; P:ribosomal small subunit biogenesis; IPI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
7Q9Y7R7    284   RL1DA_SCHPO Putative ribosome biogenesis prot...1740.024     39.7     25     47GO:0015934; C:large ribosomal subunit; IEA:InterPro.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0042273; P:ribosomal large subunit biogenesis; ISS:PomBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
8C4L574    218   MECA_EXISA Adapter protein mecA OS=Exiguobact...960.31     36.2     27     54
9Q86L05    217   RL10A_DICDI 60S ribosomal protein L10a OS=Dic...1200.43     35.8     25     51GO:0005615; C:extracellular space; IDA:dictyBase.::GO:0015934; C:large ribosomal subunit; IEA:InterPro.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
10Q963B6    217   RL10A_SPOFR 60S ribosomal protein L10a OS=Spo...1217.6     32     26     48GO:0015934; C:large ribosomal subunit; IEA:InterPro.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 10 1 - 10
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::