Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR041C
Length:
210
Number of sequences:
5887
Description:
YHR041C SRB2 SGDID:S000001083, Chr VIII from 189749-189131,189864-189851, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; general transcription factor involved in telomere maintenance"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P34162    210   MED20_YEAST Mediator of RNA polymerase II tra...2106e-154     432     100     100GO:0070847; C:core mediator complex; IDA:SGD.::GO:0016592; C:mediator complex; IEA:InterPro.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IDA:SGD.::GO:0019904; F:protein domain specific binding; IGI:SGD.::GO:0001128; F:RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly; IDA:SGD.::GO:0001135; F:RNA polymerase II transcription factor recruiting transcription factor activity; IMP:SGD.::GO:0001129; F:TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly; IDA:SGD.
GO:0010689; P:negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to chemical stimulus; IMP:SGD.::GO:0010691; P:negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels; IMP:SGD.
2Q75F10    209   MED20_ASHGO Mediator of RNA polymerase II tra...2128e-62     197     46     66GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
3Q6FVZ8    215   MED20_CANGA Mediator of RNA polymerase II tra...2213e-56     183     48     66GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
4Q6CTQ9    211   MED20_KLULA Mediator of RNA polymerase II tra...2157e-41     144     38     59GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
5A3GGE8    237   MED20_PICST Mediator of RNA polymerase II tra...2353e-23     98.2     27     50GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
6Q6BXG1    236   MED20_DEBHA Mediator of RNA polymerase II tra...2347e-21     91.3     28     49GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
7Q6CAY6    218   MED20_YARLI Mediator of RNA polymerase II tra...2230.0000004     52     24     43GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
8A5WH98    390   FADA_PSYWF 3-ketoacyl-CoA thiolase OS=Psychro...401.1     33.5     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003988; F:acetyl-CoA C-acyltransferase activity; IEA:EC.
GO:0006631; P:fatty acid metabolic process; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
9Q313L3    864   SECA_DESDG Protein translocase subunit SecA O...791.7     33.1     32     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0017038; P:protein import; IEA:InterPro.::GO:0006605; P:protein targeting; IEA:InterPro.
10Q54ED6    2542   PKS41_DICDI Probable polyketide synthase 41 O...1263.8     32.3     24     47GO:0005615; C:extracellular space; IDA:dictyBase.
GO:0000036; F:acyl carrier activity; IEA:InterPro.::GO:0048037; F:cofactor binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:InterPro.::GO:0016747; F:transferase activity, transferring acyl groups other than amino-acyl groups; IEA:InterPro.
GO:0009058; P:biosynthetic process; IEA:InterPro.
11A8IG20    1058   IF2_AZOC5 Translation initiation factor IF-2 ...1124     32     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
12Q3KNY0    2849   IGFN1_MOUSE Immunoglobulin-like and fibronect...1264.8     32     27     40GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0030018; C:Z disc; IDA:UniProtKB.
13Q70LM4    5085   LGRD_BREPA Linear gramicidin synthase subunit...746.1     31.6     30     55
GO:0000036; F:acyl carrier activity; IEA:InterPro.::GO:0048037; F:cofactor binding; IEA:InterPro.::GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.::GO:0004043; F:L-aminoadipate-semialdehyde dehydrogenase activity; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0031177; F:phosphopantetheine binding; IEA:InterPro.
GO:0017000; P:antibiotic biosynthetic process; IEA:UniProtKB-KW.
records
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