Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHR031C
Length:
723
Number of sequences:
5887
Description:
YHR031C RRM3 SGDID:S000001073, Chr VIII from 172970-170799, Genome Release 64-1-1, reverse complement, Verified ORF, "DNA helicase involved in rDNA replication and Ty1 transposition; relieves replication fork pauses at telomeric regions; structurally and functionally related to Pif1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38766    723   RRM3_YEAST ATP-dependent helicase RRM3 OS=Sac...7230     1488     100     100GO:0005724; C:nuclear telomeric heterochromatin; IPI:SGD.::GO:0005657; C:replication fork; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IDA:SGD.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IGI:SGD.::GO:0097046; P:replication fork progression beyond termination site; IMP:SGD.
2Q9UUA2    805   PIF1_SCHPO DNA repair and recombination prote...5072e-126     402     44     64GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IDA:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; ISS:PomBase.::GO:0043137; P:DNA replication, removal of RNA primer; IGI:PomBase.::GO:0043504; P:mitochondrial DNA repair; IMP:PomBase.::GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:PomBase.::GO:0000723; P:telomere maintenance; IMP:PomBase.
3A6ZM04    859   PIF1_YEAS7 DNA repair and recombination prote...1293e-25     115     46     65GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
4P07271    859   PIF1_YEAST DNA repair and recombination prote...1293e-25     115     46     65GO:0031966; C:mitochondrial membrane; IDA:SGD.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003678; F:DNA helicase activity; IDA:SGD.::GO:0010521; F:telomerase inhibitor activity; IDA:SGD.
GO:0006310; P:DNA recombination; IMP:SGD.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.::GO:0032211; P:negative regulation of telomere maintenance via telomerase; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
5Q1HG60    637   PIF1_RAT ATP-dependent DNA helicase PIF1 OS=R...1095e-17     89     41     62
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
6Q0R4F1    635   PIF1_XENLA ATP-dependent DNA helicase PIF1 OS...1281e-18     94.4     38     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
7Q9H611    641   PIF1_HUMAN ATP-dependent DNA helicase PIF1 OS...1274e-18     92.4     39     57GO:0000784; C:nuclear chromosome, telomeric region; IDA:HGNC.
GO:0005524; F:ATP binding; IDA:HGNC.::GO:0043141; F:ATP-dependent 5'-3' DNA helicase activity; IDA:HGNC.::GO:0033682; F:ATP-dependent 5'-3' DNA/RNA helicase activity; IDA:BHF-UCL.::GO:0000287; F:magnesium ion binding; IDA:HGNC.::GO:0017116; F:single-stranded DNA-dependent ATP-dependent DNA helicase activity; IDA:HGNC.::GO:0042162; F:telomeric DNA binding; IDA:HGNC.
GO:0051974; P:negative regulation of telomerase activity; IDA:HGNC.::GO:0032204; P:regulation of telomere maintenance; IDA:HGNC.
8Q7ZV90    639   PIF1_DANRE ATP-dependent DNA helicase PIF1 OS...2232e-20     99.8     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
9Q80SX8    650   PIF1_MOUSE ATP-dependent DNA helicase PIF1 OS...1276e-17     88.6     39     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
10Q9QSK3    530   VF030_IIV6 Uncharacterized protein 030L OS=In...5296e-54     199     30     51
GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
11Q196V4    473   VF030_IIV3 Uncharacterized protein 106R OS=In...1130.000000001     65.1     35     51
GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
12Q58914    1175   Y1519_METJA Uncharacterized protein MJ1519 OS...2770.000002     55.5     25     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
13P32270    439   DDA_BPT4 ATP-dependent DNA helicase dda OS=En...2140.055     40.4     28     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
14P53706    1323   HST6_CANAW Alpha-factor-transporting ATPase O...1080.59     37.4     32     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042626; F:ATPase activity, coupled to transmembrane movement of substances; IEA:InterPro.
15Q9HZN2    192   Y2972_PSEAE Maf-like protein PA2972 OS=12228)...671.5     35     31     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
16P57530    602   EX5A_BUCAI Exodeoxyribonuclease V alpha chain...493.5     34.7     45     57GO:0009338; C:exodeoxyribonuclease V complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0008854; F:exodeoxyribonuclease V activity; IEA:EC.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
17P09119    513   CDC6_YEAST Cell division control protein 6 OS...703.9     34.3     34     56GO:0031261; C:DNA replication preinitiation complex; IDA:SGD.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0005656; C:pre-replicative complex; IDA:SGD.
GO:0005524; F:ATP binding; IDA:SGD.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003688; F:DNA replication origin binding; IDA:SGD.::GO:0005525; F:GTP binding; IDA:SGD.::GO:0003924; F:GTPase activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0006267; P:pre-replicative complex assembly; IDA:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:SGD.
18Q4UK40    1207   DPO3A_RICFE DNA polymerase III subunit alpha ...1784.7     34.3     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
19A1DE13    1538   DCL1_NEOFI Dicer-like protein 1 OS=181) (Aspe...445.2     34.3     39     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004629; F:phospholipase C activity; IEA:InterPro.::GO:0004525; F:ribonuclease III activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0006629; P:lipid metabolic process; IEA:InterPro.::GO:0050688; P:regulation of defense response to virus; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
20P38859    1522   DNA2_YEAST DNA replication ATP-dependent heli...3055.9     34.3     24     42GO:0005737; C:cytoplasm; IDA:SGD.::GO:0000784; C:nuclear chromosome, telomeric region; IDA:SGD.
GO:0017108; F:5'-flap endonuclease activity; IDA:SGD.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IDA:SGD.::GO:0000739; F:DNA strand annealing activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000014; F:single-stranded DNA specific endodeoxyribonuclease activity; IDA:SGD.
GO:0006281; P:DNA repair; IGI:SGD.::GO:0006273; P:lagging strand elongation; IMP:SGD.::GO:0001302; P:replicative cell aging; IMP:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
21Q54RU1    678   ABCB6_DICDI ABC transporter B family member 6...1636.2     33.9     25     40GO:0016021; C:integral to membrane; IBA:RefGenome.::GO:0005774; C:vacuolar membrane; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042626; F:ATPase activity, coupled to transmembrane movement of substances; IBA:RefGenome.
GO:0070574; P:cadmium ion transmembrane transport; IBA:RefGenome.::GO:0071585; P:detoxification of cadmium ion; IBA:RefGenome.
22Q89AB2    618   EX5A_BUCBP Exodeoxyribonuclease V alpha chain...1476.7     33.9     27     46GO:0009338; C:exodeoxyribonuclease V complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0008854; F:exodeoxyribonuclease V activity; IEA:EC.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
23Q92GB2    1181   DPO3A_RICCN DNA polymerase III subunit alpha ...1787     33.9     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
24Q68VX1    1180   DPO3A_RICTY DNA polymerase III subunit alpha ...1667     33.9     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
25Q9PLE5    753   PRIA_CHLMU Primosomal protein N' OS=Chlamydia...837.3     33.5     29     43GO:0005658; C:alpha DNA polymerase:primase complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006269; P:DNA replication, synthesis of RNA primer; IEA:UniProtKB-KW.
26P68908    503   Y2921_MYCBO Uncharacterized protein Mb2921c O...899     33.1     27     46
GO:0016851; F:magnesium chelatase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0015995; P:chlorophyll biosynthetic process; IEA:InterPro.::GO:0015979; P:photosynthesis; IEA:InterPro.
27P68909    503   Y2897_MYCTU Uncharacterized protein Rv2897c/M...899     33.1     27     46GO:0005886; C:plasma membrane; IDA:MTBBASE.
GO:0016851; F:magnesium chelatase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0015995; P:chlorophyll biosynthetic process; IEA:InterPro.::GO:0040007; P:growth; IMP:MTBBASE.::GO:0015979; P:photosynthesis; IEA:InterPro.
records
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