| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
481 | Q5ZKR5 | 168 | NCBP2_CHICK Nuclear cap-binding protein subun... | 76 | 0.97 | 35 | 28 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 482 | Q99729 | 332 | ROAA_HUMAN Heterogeneous nuclear ribonucleopr... | 153 | 0.97 | 35.8 | 19 | 41 | GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0005634; C:nucleus; ISS:HGNC.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0001837; P:epithelial to mesenchymal transition; ISS:HGNC.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:HGNC. | 483 | Q9VRV7 | 121 | PM14_DROME Pre-mRNA branch site p14-like prot... | 60 | 1 | 34.3 | 32 | 53 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase. | 484 | Q3SZM1 | 296 | MK67I_BOVIN MKI67 FHA domain-interacting nucl... | 92 | 1.1 | 35.8 | 26 | 52 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB. | 485 | Q8I4V2 | 357 | RBM22_PLAF7 Pre-mRNA-splicing factor PFL2310w... | 100 | 1.1 | 35.8 | 28 | 47 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 486 | Q5NVM8 | 305 | RNPS1_PONAB RNA-binding protein with serine-r... | 83 | 1.1 | 35.8 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 487 | Q99M28 | 305 | RNPS1_MOUSE RNA-binding protein with serine-r... | 83 | 1.1 | 35.8 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 488 | Q4R5N1 | 305 | RNPS1_MACFA RNA-binding protein with serine-r... | 83 | 1.1 | 35.8 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 489 | Q15287 | 305 | RNPS1_HUMAN RNA-binding protein with serine-r... | 83 | 1.1 | 35.8 | 27 | 49 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 490 | A6QR16 | 305 | RNPS1_BOVIN RNA-binding protein with serine-r... | 83 | 1.1 | 35.8 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 491 | Q14103 | 355 | HNRPD_HUMAN Heterogeneous nuclear ribonucleop... | 57 | 3.4 | 34.3 | 32 | 51 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0042162; F:telomeric DNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0045893; P:positive regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006401; P:RNA catabolic process; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 492 | Q60668 | 355 | HNRPD_MOUSE Heterogeneous nuclear ribonucleop... | 57 | 3.3 | 34.3 | 32 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0042162; F:telomeric DNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 493 | Q01560 | 414 | NOP3_YEAST Nucleolar protein 3 OS=Saccharomyc... | 151 | 1.2 | 35.8 | 23 | 45 | GO:0005737; C:cytoplasm; IMP:SGD.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IGI:SGD.::GO:2000805; P:negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled; IDA:SGD.::GO:0017148; P:negative regulation of translation; IDA:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006415; P:translational termination; IMP:SGD. | 494 | Q9GRW7 | 697 | NONA_DROVI Protein no-on-transient A OS=Droso... | 163 | 1.2 | 36.2 | 26 | 47 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 495 | Q54WM4 | 233 | EIF3G_DICDI Eukaryotic translation initiation... | 101 | 1.2 | 35.4 | 27 | 54 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:dictyBase. | 496 | Q6AYK1 | 305 | RNPS1_RAT RNA-binding protein with serine-ric... | 83 | 1.2 | 35.4 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 497 | Q7XTT4 | 707 | NUCL2_ORYSJ Nucleolin 2 OS=Oryza sativa subsp... | 88 | 1.2 | 36.2 | 27 | 49 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 498 | Q6NU14 | 291 | HNDLB_XENLA Heterogeneous nuclear ribonucleop... | 151 | 1.2 | 35.4 | 23 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 499 | A1C646 | 290 | EIF3G_ASPCL Eukaryotic translation initiation... | 57 | 1.2 | 35.4 | 26 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 500 | Q7RUX3 | 385 | SLT11_NEUCR Pre-mRNA-splicing factor slt-11 O... | 72 | 1.3 | 35.4 | 26 | 50 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 501 | P40565 | 148 | IST3_YEAST U2 snRNP component IST3 OS=Sacchar... | 72 | 1.3 | 34.3 | 29 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0070274; C:RES complex; IDA:SGD.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005686; C:U2 snRNP; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000349; P:generation of catalytic spliceosome for first transesterification step; IMP:SGD.::GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0000245; P:spliceosomal complex assembly; IMP:SGD. | 502 | O81126 | 200 | RZP22_ARATH Serine/arginine-rich splicing fac... | 56 | 1.3 | 35 | 34 | 50 | GO:0016607; C:nuclear speck; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:TAIR. | 503 | P49960 | 444 | PRP24_YEAST U4/U6 snRNA-associated-splicing f... | 45 | 1.4 | 35.8 | 40 | 56 | GO:0005688; C:U6 snRNP; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017070; F:U6 snRNA binding; IDA:SGD. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; IDA:SGD.::GO:0000245; P:spliceosomal complex assembly; IMP:SGD. | 504 | Q293V6 | 154 | NCBP2_DROPS Nuclear cap-binding protein subun... | 79 | 1.4 | 34.3 | 27 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 505 | B4GLK8 | 154 | NCBP2_DROPE Nuclear cap-binding protein subun... | 79 | 1.4 | 34.3 | 27 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 506 | B4KCD5 | 154 | NCBP2_DROMO Nuclear cap-binding protein subun... | 79 | 1.4 | 34.3 | 25 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 507 | Q9U1N0 | 535 | HRP65_CHITE Hrp65 protein OS=Chironomus tenta... | 96 | 4.2 | 34.3 | 28 | 50 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB. | 508 | B3LYP1 | 154 | NCBP2_DROAN Nuclear cap-binding protein subun... | 79 | 1.4 | 34.3 | 25 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 509 | P10979 | 157 | GRPA_MAIZE Glycine-rich RNA-binding, abscisic... | 71 | 1.4 | 34.3 | 27 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006950; P:response to stress; IEA:UniProtKB-KW. | 510 | Q9GRX4 | 698 | NONA_DROLR Protein no-on-transient A OS=Droso... | 163 | 1.5 | 35.8 | 25 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 511 | Q2GHC9 | 590 | SYD_EHRCR Aspartate--tRNA ligase OS=Ehrlichia... | 82 | 1.5 | 35.8 | 28 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004815; F:aspartate-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0006418; P:tRNA aminoacylation for protein translation; IEA:InterPro. |
