Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHL033C
Length:
256
Number of sequences:
5887
Description:
YHL033C RPL8A SGDID:S000001025, Chr VIII from 36025-35255, Genome Release 64-1-1, reverse complement, Verified ORF, "Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Bp and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P39990    126   SNU13_YEAST 13 kDa ribonucleoprotein-associat...560.0007     42     32     55GO:0031428; C:box C/D snoRNP complex; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
92Q6PBV6    150   NHP2_DANRE H/ACA ribonucleoprotein complex su...890.0009     42.4     25     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
93P55770    128   NH2L1_RAT NHP2-like protein 1 OS=Rattus norve...560.0009     41.6     30     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
94Q9D0T1    128   NH2L1_MOUSE NHP2-like protein 1 OS=Mus muscul...560.0009     41.6     30     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
95Q4R5C6    128   NH2L1_MACFA NHP2-like protein 1 OS=Macaca fas...560.0009     41.6     30     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
96P55769    128   NH2L1_HUMAN NHP2-like protein 1 OS=Homo sapie...560.0009     41.6     30     57GO:0031428; C:box C/D snoRNP complex; NAS:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
97Q3B8S0    128   NH2L1_BOVIN NHP2-like protein 1 OS=Bos taurus...560.0009     41.6     30     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
98Q9P7H0    154   NHP2_SCHPO H/ACA ribonucleoprotein complex su...650.001     41.6     34     52GO:0031429; C:box H/ACA snoRNP complex; IGI:PomBase.
GO:0034513; F:box H/ACA snoRNA binding; IGI:PomBase.::GO:0019843; F:rRNA binding; IC:PomBase.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.::GO:0031120; P:snRNA pseudouridine synthesis; IGI:PomBase.
99Q9CRB2    153   NHP2_MOUSE H/ACA ribonucleoprotein complex su...890.002     41.2     22     43GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
100Q5E950    153   NHP2_BOVIN H/ACA ribonucleoprotein complex su...890.002     41.2     22     44GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
101Q2NGM2    123   RL7A_METST 50S ribosomal protein L7Ae OS=Meth...530.004     39.7     38     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
102Q9NX24    153   NHP2_HUMAN H/ACA ribonucleoprotein complex su...890.008     39.3     20     44GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
103Q5RC65    153   NHP2_PONAB H/ACA ribonucleoprotein complex su...890.011     38.9     20     44GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
104Q60YI3    163   NHP2_CAEBR Putative H/ACA ribonucleoprotein c...800.048     37.4     23     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
105Q9XXD4    163   NHP2_CAEEL Putative H/ACA ribonucleoprotein c...730.1     36.2     21     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
GO:0030515; F:snoRNA binding; ISS:UniProtKB.
GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
106P32729    100   YLXQ_BACSU Probable ribosomal protein ylxQ OS...852.1     31.6     31     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
107B6JCI0    363   HRCA_OLICO Heat-inducible transcription repre...1292.3     33.1     29     47
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
108P36145    328   T2EB_YEAST Transcription initiation factor II...1005.2     32     23     47GO:0005673; C:transcription factor TFIIE complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
109Q21568    128   NH2L1_CAEEL NHP2-like protein 1 homolog OS=Ca...567.1     30.4     34     61GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
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