Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHL004W
Length:
394
Number of sequences:
5887
Description:
YHL004W MRP4 SGDID:S000000996, Chr VIII from 99219-100403, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the small subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
991Q9Y7L8    292   RSSA1_SCHPO 40S ribosomal protein S0-A OS=Sch...1950.000000003     61.2     26     44GO:0030686; C:90S preribosome; ISS:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome.::GO:0006407; P:rRNA export from nucleus; ISS:RefGenome.
992B2B1Z3    291   RSSA_PODAN 40S ribosomal protein S0 OS=(Pleur...1950.000000003     61.2     26     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
993Q8TV23    203   RS2_METKA 30S ribosomal protein S2P OS=100938...1970.000000003     59.7     24     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
994C5PA09    291   RSSA_COCP7 40S ribosomal protein S0 OS=Coccid...1950.000000003     61.2     25     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
995Q1E1R2    291   RSSA_COCIM 40S ribosomal protein S0 OS=Coccid...1950.000000003     61.2     25     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
996O59295    202   RS2_PYRHO 30S ribosomal protein S2P OS=NBRC 1...1970.000000004     59.7     22     48GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
997A1CL63    298   RSSA_ASPCL 40S ribosomal protein S0 OS=3887 /...2050.000000004     61.2     24     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
998Q4WYK1    297   RSSA_ASPFU 40S ribosomal protein S0 OS=A1100)...2050.000000004     60.8     24     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
999B0XWG9    297   RSSA_ASPFC 40S ribosomal protein S0 OS=(Asper...2050.000000004     60.8     24     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
1000C1G1P4    295   RSSA_PARBD 40S ribosomal protein S0 OS=Paraco...1950.000000004     60.8     25     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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