Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHL004W
Length:
394
Number of sequences:
5887
Description:
YHL004W MRP4 SGDID:S000000996, Chr VIII from 99219-100403, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the small subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901A9UPA2    278   RSSA_MONBE 40S ribosomal protein SA OS=Monosi...2150.000000000009     68.6     25     43GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
902O22518    310   RSSA_SOYBN 40S ribosomal protein SA OS=Glycin...1950.000000000009     68.9     28     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
903A5BUU4    312   RSSA_VITVI 40S ribosomal protein SA OS=Vitis ...1950.00000000001     68.6     27     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
904A8BE86    245   RSSA_GIAIC 40S ribosomal protein SA OS=lambli...2100.00000000001     67.8     25     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
905A4WH11    208   RS2_PYRAR 30S ribosomal protein S2P OS=Pyroba...1970.00000000002     66.6     27     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
906Q16ZR8    288   RSSA_AEDAE 40S ribosomal protein SA OS=Aedes ...1950.00000000002     67.4     28     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
907B5FXT6    296   RSSA_TAEGU 40S ribosomal protein SA OS=Taenio...1950.00000000003     67.4     29     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
908P50890    296   RSSA_CHICK 40S ribosomal protein SA OS=Gallus...1950.00000000003     67.4     29     45GO:0030686; C:90S preribosome; IBA:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; IBA:RefGenome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0043236; F:laminin binding; ISS:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IBA:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; IBA:RefGenome.::GO:0006407; P:rRNA export from nucleus; IBA:RefGenome.::GO:0006412; P:translation; IBA:RefGenome.
909P46753    312   RT02_ACACA Ribosomal protein S2, mitochondria...2070.00000000003     67.4     26     44GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
910Q8ZYE2    208   RS2_PYRAE 30S ribosomal protein S2P OS=/ NBRC...1970.00000000003     65.9     27     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
911Q6P8D1    306   RSSA_XENTR 40S ribosomal protein SA OS=Xenopu...1950.00000000003     67.4     28     45GO:0030686; C:90S preribosome; ISS:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; ISS:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome.::GO:0006407; P:rRNA export from nucleus; ISS:RefGenome.::GO:0006412; P:translation; ISS:RefGenome.
912P38982    295   RSSA_CRIGR 40S ribosomal protein SA OS=Cricet...1990.00000000003     67     29     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; ISS:UniProtKB.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
913A8PXY6    290   RSSA_MALGO 40S ribosomal protein S0 OS=(Dandr...2020.00000000004     66.6     26     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
914A3MS50    208   RS2_PYRCJ 30S ribosomal protein S2P OS=Pyroba...1970.00000000005     65.5     27     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
915Q5JJD2    201   RS2_PYRKO 30S ribosomal protein S2P OS=(Therm...1970.00000000005     65.1     23     48GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
916A6YRY8    295   RSSA_SHEEP 40S ribosomal protein SA OS=Ovis a...1950.00000000006     66.2     29     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; ISS:UniProtKB.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
917P14206    295   RSSA_MOUSE 40S ribosomal protein SA OS=Mus mu...1950.00000000006     66.2     29     45GO:0030686; C:90S preribosome; IBA:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; IBA:RefGenome.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0043236; F:laminin binding; IDA:MGI.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IBA:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; IBA:RefGenome.::GO:0006407; P:rRNA export from nucleus; IBA:RefGenome.::GO:0006412; P:translation; IBA:RefGenome.
918P26452    295   RSSA_BOVIN 40S ribosomal protein SA OS=Bos ta...1950.00000000006     66.2     29     44GO:0030686; C:90S preribosome; ISS:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.::GO:0005624; C:membrane fraction; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0043236; F:laminin binding; ISS:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; ISS:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome.::GO:0006407; P:rRNA export from nucleus; ISS:RefGenome.::GO:0006412; P:translation; ISS:RefGenome.
919P08865    295   RSSA_HUMAN 40S ribosomal protein SA OS=Homo s...1950.00000000006     66.2     29     45GO:0030686; C:90S preribosome; IBA:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB.::GO:0005634; C:nucleus; TAS:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0043022; F:ribosome binding; IPI:UniProtKB.::GO:0003735; F:structural constituent of ribosome; IBA:RefGenome.
GO:0007155; P:cell adhesion; NAS:ProtInc.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0000028; P:ribosomal small subunit assembly; IBA:RefGenome.::GO:0006407; P:rRNA export from nucleus; IBA:RefGenome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
920Q8MPF7    287   RSSA_TOXGO 40S ribosomal protein SA OS=Toxopl...1640.00000000006     66.2     27     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
921Q2L9X0    295   RSSA_CHLAE 40S ribosomal protein SA OS=Chloro...1950.00000000006     66.2     29     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; ISS:UniProtKB.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
922Q4GWZ2    295   RSSA_PIG 40S ribosomal protein SA OS=Sus scro...1950.00000000007     66.2     29     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; ISS:UniProtKB.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
923Q3ZM03    306   RSSA_XENLA 40S ribosomal protein SA OS=Xenopu...1950.00000000007     66.2     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
924P38983    295   RSSA_RAT 40S ribosomal protein SA OS=Rattus n...1950.00000000007     66.2     29     44GO:0030686; C:90S preribosome; IBA:RefGenome.::GO:0005604; C:basement membrane; IDA:RGD.::GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD.::GO:0005624; C:membrane fraction; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0005055; F:laminin receptor activity; TAS:RGD.::GO:0003735; F:structural constituent of ribosome; IBA:RefGenome.
GO:0016337; P:cell-cell adhesion; IDA:RGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:RefGenome.::GO:0030855; P:epithelial cell differentiation; IEP:RGD.::GO:0000028; P:ribosomal small subunit assembly; IBA:RefGenome.::GO:0006407; P:rRNA export from nucleus; IBA:RefGenome.::GO:0006412; P:translation; IBA:RefGenome.
925Q8H173    280   RSSA2_ARATH 40S ribosomal protein Sa-2 OS=Ara...1950.00000000007     65.9     27     44GO:0009507; C:chloroplast; IDA:TAIR.::GO:0022627; C:cytosolic small ribosomal subunit; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
926B3RPX6    286   RSSA_TRIAD 40S ribosomal protein SA OS=Tricho...2100.00000000008     65.9     25     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
927P39478    225   RS2_SULAC 30S ribosomal protein S2P OS=NBRC 1...1970.00000000008     65.1     25     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
928A3CWI6    205   RS2_METMJ 30S ribosomal protein S2P OS=Methan...2050.00000000008     64.7     27     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
929O80377    297   RSSA_DAUCA 40S ribosomal protein SA OS=Daucus...1950.00000000009     65.9     27     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
930Q6CGM0    270   RSSA_YARLI 40S ribosomal protein S0 OS=lipoly...2050.0000000001     65.5     23     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
931Q7PZ81    285   RSSA_ANOGA 40S ribosomal protein SA OS=Anophe...1950.0000000001     65.5     27     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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