Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YHL004W
Length:
394
Number of sequences:
5887
Description:
YHL004W MRP4 SGDID:S000000996, Chr VIII from 99219-100403, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the small subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871Q06J20    281   RR2_BIGNA 30S ribosomal protein S2, chloropla...2233e-21     95.9     28     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
872B5XIY5    255   RS2_STRPZ 30S ribosomal protein S2 OS=Strepto...2253e-21     95.5     30     52GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
873P0C482    236   RR2_ORYSJ 30S ribosomal protein S2, chloropla...2228e-21     94     28     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
874P0C481    236   RR2_ORYSI 30S ribosomal protein S2, chloropla...2228e-21     94     28     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
875P0C480    236   RR2_ORYSA 30S ribosomal protein S2, chloropla...2228e-21     94     28     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
876Q6AP41    204   RS2_DESPS 30S ribosomal protein S2 OS=Desulfo...1981e-20     92.8     28     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
877Q7NAW2    323   RS2_MYCGA 30S ribosomal protein S2 OS=Mycopla...2293e-19     90.9     29     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
878P27068    237   RR2_EPIVI Plastid 30S ribosomal protein S2 OS...2304e-19     89     28     47GO:0009536; C:plastid; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
879P47316    284   RS2_MYCGE 30S ribosomal protein S2 OS=Mycopla...2214e-18     87     28     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
880Q06SH8    314   RR2_STIHE 30S ribosomal protein S2, chloropla...2203e-17     85.1     26     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
881Q4U8U5    274   RSSA_THEAN 40S ribosomal protein SA OS=Theile...2000.000000000000004     78.6     27     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
882Q4N1J1    274   RSSA_THEPA 40S ribosomal protein SA OS=Theile...2000.000000000000005     78.2     27     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
883P75560    294   RS2_MYCPN 30S ribosomal protein S2 OS=Mycopla...2210.000000000000008     77.8     28     47GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
884P38984    293   RSSA_HYDVD 40S ribosomal protein SA OS=Hydra ...1950.00000000000001     77     29     48GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
885Q4Z694    263   RSSA_PLABA 40S ribosomal protein SA OS=Plasmo...2000.00000000000007     74.7     26     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
886Q7RBT0    263   RSSA_PLAYO 40S ribosomal protein SA OS=Plasmo...2000.00000000000007     74.7     26     46GO:0030686; C:90S preribosome; ISS:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.
GO:0003735; F:structural constituent of ribosome; ISS:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome.::GO:0006407; P:rRNA export from nucleus; ISS:RefGenome.::GO:0006412; P:translation; ISS:RefGenome.
887Q4XZN2    263   RSSA_PLACH 40S ribosomal protein SA OS=Plasmo...2000.00000000000007     74.3     26     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
888A4IDS4    246   RSSA_LEIIN 40S ribosomal protein SA OS=Leishm...1940.0000000000004     72     27     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
889P46741    274   RT02_PROWI Ribosomal protein S2, mitochondria...2310.0000000000004     72.4     26     43GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
890Q8IJD4    263   RSSA_PLAF7 40S ribosomal protein SA OS=Plasmo...2000.0000000000005     72     25     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
891Q4Q0Q0    246   RSSA_LEIMA 40S ribosomal protein SA OS=Leishm...1940.0000000000009     70.9     27     45GO:0030686; C:90S preribosome; ISS:RefGenome.::GO:0022627; C:cytosolic small ribosomal subunit; ISS:RefGenome.
GO:0003735; F:structural constituent of ribosome; ISS:RefGenome.
GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:RefGenome.::GO:0000028; P:ribosomal small subunit assembly; ISS:RefGenome.::GO:0006407; P:rRNA export from nucleus; ISS:RefGenome.::GO:0006412; P:translation; ISS:RefGenome.
892O65751    300   RSSA_CICAR 40S ribosomal protein SA OS=Cicer ...1950.000000000001     71.2     28     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
893A4HQ28    246   RSSA_LEIBR 40S ribosomal protein SA OS=Leishm...1940.000000000001     70.5     26     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
894A5UN64    198   RS2_METS3 30S ribosomal protein S2P OS=Methan...1970.000000000002     68.9     25     50GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
895A5KE24    263   RSSA_PLAVS 40S ribosomal protein SA OS=Plasmo...2000.000000000005     68.9     24     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
896A1RTJ3    207   RS2_PYRIL 30S ribosomal protein S2P OS=Pyroba...1970.000000000005     68.2     28     44GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
897B3L230    264   RSSA_PLAKH 40S ribosomal protein SA OS=Plasmo...2000.000000000005     68.9     24     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
898B0X6V0    290   RSSA_CULQU 40S ribosomal protein SA OS=Culex ...1950.000000000007     68.9     28     45GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
899Q9GCB9    219   RT02_ARATH Ribosomal protein S2, mitochondria...2020.000000000007     67.8     25     45GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; TAS:TAIR.
GO:0006412; P:translation; TAS:TAIR.
900Q5DA90    279   RSSA_SCHJA 40S ribosomal protein SA OS=Schist...1960.000000000008     68.6     28     48GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
901A9UPA2    278   RSSA_MONBE 40S ribosomal protein SA OS=Monosi...2150.000000000009     68.6     25     43GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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