Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR276C
Length:
553
Number of sequences:
5887
Description:
YGR276C RNH70 SGDID:S000003508, Chr VII from 1045480-1043819, Genome Release 64-1-1, reverse complement, Verified ORF, "3'-5' exoribonuclease; required for maturation of 3' ends of 5S rRNA and tRNA-Arg3 from dicistronic transcripts"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53331    553   REXO1_YEAST RNA exonuclease 1 OS=Saccharomyce...5530     1137     100     100GO:0005634; C:nucleus; IDA:SGD.
GO:0000175; F:3'-5'-exoribonuclease activity; IMP:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0002107; P:generation of mature 3'-end of 5S rRNA generated by RNA polymerase III; IMP:SGD.::GO:0034415; P:tRNA 3'-trailer cleavage, exonucleolytic; IMP:SGD.
2O94443    631   YFE9_SCHPO Uncharacterized exonuclease C637.0...5406e-68     237     29     52GO:0005634; C:nucleus; IDA:PomBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0034415; P:tRNA 3'-trailer cleavage, exonucleolytic; ISS:PomBase.::GO:0034476; P:U5 snRNA 3'-end processing; ISS:PomBase.
3Q8L7M4    567   SDN5_ARATH Small RNA degrading nuclease 5 OS=...4893e-46     175     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
4A0PJM3    583   GORL_HUMAN Putative exonuclease GOR-like prot...1551e-35     144     48     66GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
5Q8IX06    675   GOR_HUMAN Exonuclease GOR OS=Homo sapiens (Hu...1553e-35     144     48     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
6P48778    690   GOR_PANTR Exonuclease GOR OS=Pan troglodytes ...1559e-35     142     48     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
7Q7TT28    1213   REXO1_MOUSE RNA exonuclease 1 homolog OS=Mus ...1615e-33     138     47     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
8A1A5R7    754   REXON_RAT Putative RNA exonuclease NEF-sp OS=...1987e-32     134     39     59
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
9Q2T9U5    783   REXON_BOVIN Putative RNA exonuclease NEF-sp O...2184e-31     132     38     57
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
10Q96IC2    774   REXON_HUMAN Putative RNA exonuclease NEF-sp O...2043e-30     129     37     59GO:0005730; C:nucleolus; IDA:LIFEdb.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
11Q4R9F7    772   REXON_MACFA Putative RNA exonuclease NEF-sp O...1984e-30     129     38     59GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
12Q8N1G1    1221   REXO1_HUMAN RNA exonuclease 1 homolog OS=Homo...1611e-28     124     47     65GO:0005634; C:nucleus; IDA:HPA.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
13Q6FIU7    398   REXO3_CANGA RNA exonuclease 3 OS=NRRL Y-65) (...1711e-27     118     40     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
14Q6CJB5    478   REXO3_KLULA RNA exonuclease 3 OS=1267 / NRRL ...1603e-25     112     41     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
15Q750A5    382   REXO3_ASHGO RNA exonuclease 3 OS=Y-1056) (Yea...1601e-24     109     40     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
16Q9FFG1    466   SDN2_ARATH Small RNA degrading nuclease 2 OS=...2213e-24     109     34     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
17Q6CFE7    757   REXO3_YARLI RNA exonuclease 3 OS=lipolytica)....1611e-23     109     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
18Q9P7H2    540   REXO3_SCHPO RNA exonuclease 3 OS=Schizosaccha...1565e-23     106     38     60GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0034476; P:U5 snRNA 3'-end processing; ISS:PomBase.
19A3KPE8    409   SDN1_ARATH Small RNA degrading nuclease 1 OS=...1848e-23     104     36     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IDA:TAIR.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0010587; P:miRNA catabolic process; IDA:TAIR.
20Q8RXK2    782   SDN3_ARATH Small RNA degrading nuclease 3 OS=...2431e-22     106     30     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
21Q12090    404   REXO3_YEAST RNA exonuclease 3 OS=Saccharomyce...1602e-22     103     39     62GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0000175; F:3'-5'-exoribonuclease activity; IMP:SGD.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0043628; P:ncRNA 3'-end processing; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
22O94375    260   REXO4_SCHPO RNA exonuclease 4 OS=Schizosaccha...2118e-22     99.4     33     58GO:0005730; C:nucleolus; IDA:PomBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; ISS:PomBase.
23Q10124    1647   PQE1_CAEEL Putative RNA exonuclease pqe-1 OS=...1688e-22     103     36     58GO:0005634; C:nucleus; IDA:WormBase.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
24Q5AL29    404   REXO3_CANAL RNA exonuclease 3 OS=Candida albi...1639e-22     100     38     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
25Q2YDK1    349   I20L2_BOVIN Interferon-stimulated 20 kDa exon...1629e-21     97.4     40     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
26Q91560    421   REXO4_XENLA RNA exonuclease 4 OS=Xenopus laev...1632e-20     97.4     37     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
27Q6FQA0    263   REXO4_CANGA RNA exonuclease 4 OS=NRRL Y-65) (...1602e-20     95.1     38     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
28Q6AXU3    369   I20L2_RAT Interferon-stimulated 20 kDa exonuc...1623e-20     96.3     40     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
29Q9GZR2    422   REXO4_HUMAN RNA exonuclease 4 OS=Homo sapiens...1623e-20     97.1     38     56GO:0005730; C:nucleolus; IDA:LIFEdb.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
30Q9H9L3    353   I20L2_HUMAN Interferon-stimulated 20 kDa exon...1623e-20     95.9     39     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
31B2GUW6    332   AEN_RAT Apoptosis-enhancing nuclease OS=Rattu...1685e-20     95.1     36     58GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0004527; F:exonuclease activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
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