Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR271W
Length:
1967
Number of sequences:
5887
Description:
YGR271W SLH1 SGDID:S000003503, Chr VII from 1031791-1037694, Genome Release 64-1-1, Verified ORF, "Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241B0Y6V2    740   PRM1_ASPFC Plasma membrane fusion protein prm...901.4     37.7     24     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0000746; P:conjugation; IEA:UniProtKB-KW.
242Q4HZ68    744   DBP7_GIBZE ATP-dependent RNA helicase DBP7 OS...1421.4     37.7     29     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
243Q4I7F9    721   PRP28_GIBZE Pre-mRNA-splicing ATP-dependent R...1631.4     37.4     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
244Q0U8V9    508   DBP8_PHANO ATP-dependent RNA helicase DBP8 OS...821.5     37.4     33     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
245Q1DMX8    817   PRP28_COCIM Pre-mRNA-splicing ATP-dependent R...1631.5     37.4     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
246Q755C5    554   MRH4_ASHGO ATP-dependent RNA helicase MRH4, m...1671.5     37.4     21     45GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
247A0MQH0    1917   DICER_CRIGR Endoribonuclease Dicer OS=Cricetu...1851.5     37.7     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016442; C:RNA-induced silencing complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:InterPro.
GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0030422; P:production of siRNA involved in RNA interference; ISS:UniProtKB.::GO:0030423; P:targeting of mRNA for destruction involved in RNA interference; ISS:UniProtKB.
248P38112    773   MAK5_YEAST ATP-dependent RNA helicase MAK5 OS...1921.6     37.4     27     44GO:0005730; C:nucleolus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
249Q0JL73    536   RH26_ORYSJ DEAD-box ATP-dependent RNA helicas...1541.6     37.4     23     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
250Q1E0Z3    536   DBP8_COCIM ATP-dependent RNA helicase DBP8 OS...1421.7     37.4     29     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
251A1D4V5    1111   MPH1_NEOFI ATP-dependent DNA helicase MPH1 OS...707.4     35.4     27     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
252A2QZ71    633   MRH4_ASPNC ATP-dependent RNA helicase mrh4, m...4871.7     37.4     22     37GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
253A1CWM3    742   PRM1_NEOFI Plasma membrane fusion protein prm...901.9     37.4     26     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0000746; P:conjugation; IEA:UniProtKB-KW.
254Q99PI8    473   RTN4R_MOUSE Reticulon-4 receptor OS=Mus muscu...1091.9     37     25     48GO:0031225; C:anchored to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:MGI.
GO:0005515; F:protein binding; IPI:MGI.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0007409; P:axonogenesis; IDA:MGI.
255P43809    693   RECG_HAEIN ATP-dependent DNA helicase recG OS...1041.9     37     25     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
256Q5BET6    742   ROK1_EMENI ATP-dependent RNA helicase rok1 OS...891.9     37     30     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
257Q9SF41    989   RH45_ARATH DEAD-box ATP-dependent RNA helicas...1881.9     37.4     25     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
258Q0UWC8    746   PRP28_PHANO Pre-mRNA-splicing ATP-dependent R...1522     37     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
259Q54IV3    986   DDX42_DICDI Probable ATP-dependent RNA helica...862.1     37     31     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
260A6ZL85    769   MAK5_YEAS7 ATP-dependent RNA helicase MAK5 OS...1922.1     37     27     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
261Q54EC2    663   DDX55_DICDI Probable ATP-dependent RNA helica...782.1     37     28     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
262P0CQ78    605   DBP3_CRYNJ ATP-dependent RNA helicase DBP3 OS...2132.2     37     26     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
263A5DTK7    692   MS116_LODEL ATP-dependent RNA helicase MSS116...1902.2     37     24     41GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
264P0CQ79    605   DBP3_CRYNB ATP-dependent RNA helicase DBP3 OS...2132.2     37     26     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
265Q759L6    438   SUB2_ASHGO ATP-dependent RNA helicase SUB2 OS...1522.2     36.6     26     45GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
266Q6CB69    618   DED1_YARLI ATP-dependent RNA helicase DED1 OS...752.4     36.6     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
267Q8H0U8    1166   RH42_ARATH DEAD-box ATP-dependent RNA helicas...1882.4     37     25     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
268P15043    609   RECQ_ECOLI ATP-dependent DNA helicase recQ OS...952.4     36.6     31     45GO:0043590; C:bacterial nucleoid; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:EcoliWiki.::GO:0030894; C:replisome; IDA:UniProtKB.::GO:0017117; C:single-stranded DNA-dependent ATP-dependent DNA helicase complex; IDA:EcoliWiki.
GO:0005524; F:ATP binding; IPI:EcoliWiki.::GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IDA:EcoliWiki.::GO:0005515; F:protein binding; IPI:EcoliWiki.::GO:0017116; F:single-stranded DNA-dependent ATP-dependent DNA helicase activity; IDA:EcoliWiki.::GO:0008270; F:zinc ion binding; IMP:EcoliWiki.
GO:0006310; P:DNA recombination; IDA:EcoliWiki.::GO:0006281; P:DNA repair; IGI:EcoliWiki.::GO:0006260; P:DNA replication; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
269Q6FPQ3    1052   MPH1_CANGA ATP-dependent DNA helicase MPH1 OS...1172.5     37     24     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
270Q47281    813   T1RE_ECOLX Type I restriction enzyme EcoEI R ...1342.6     36.6     29     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:InterPro.::GO:0009035; F:Type I site-specific deoxyribonuclease activity; IEA:EC.
GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
271Q7SEL0    728   PRP28_NEUCR Pre-mRNA-splicing ATP-dependent R...1302.6     36.6     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
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