UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YGR258C

Length:

1031

Number of sequences:

5887

Description:

YGR258C RAD2 SGDID:S000003490, Chr VII from 1010766-1007671, Genome Release 64-1-1, reverse complement, Verified ORF, "Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair to excise damaged DNA; subunit of Nucleotide Excision Repair Factor 3 (NEF3); homolog of human XPG protein"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
181	B6YWX4	341	FEN_THEON Flap endonuclease 1 OS=Thermococcus...	75	0.00000005	59.7	37	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
182	O29975	336	FEN_ARCFU Flap endonuclease 1 OS=9628 / NBRC ...	119	0.00000000001	70.9	34	52
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
183	Q9V0P9	343	FEN_PYRAB Flap endonuclease 1 OS=Pyrococcus a...	189	0.00000000004	69.3	32	49
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
184	O65251	383	FEN1_ARATH Flap endonuclease 1 OS=Arabidopsis...	84	0.0000000008	65.9	42	58	GO:0005829; C:cytosol; IDA:TAIR.::GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
185	O50123	343	FEN_PYRHO Flap endonuclease 1 OS=NBRC 100139 ...	86	0.0000000001	68.2	38	62
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
186	Q6L2I9	338	FEN_PICTO Flap endonuclease 1 OS=100828). GN=...	88	0.00000006	59.7	41	59
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
187	O27670	328	FEN_METTH Flap endonuclease 1 OS=thermoautotr...	102	0.0000002	57.8	35	57
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
188	A2BMI0	350	FEN_HYPBU Flap endonuclease 1 OS=Hyperthermus...	98	0.0000005	56.6	36	54
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
189	Q3IPG8	328	FEN_NATPD Flap endonuclease 1 OS=Natronomonas...	100	0.002	45.4	32	50
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
190	A3DMG2	350	FEN_STAMF Flap endonuclease 1 OS=Staphylother...	96	0.0000003	57.8	32	53
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
191	O93634	340	FEN_PYRFU Flap endonuclease 1 OS=Pyrococcus f...	78	0.00000001	62	38	62
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
192	Q9VRJ0	726	GEN_DROME Flap endonuclease GEN OS=Drosophila...	93	0.000002	55.8	30	47	GO:0005634; C:nucleus; IDA:UniProtKB.
									GO:0035312; F:5'-3' exodeoxyribonuclease activity; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008311; F:double-stranded DNA specific 3'-5' exodeoxyribonuclease activity; IDA:FlyBase.::GO:0004520; F:endodeoxyribonuclease activity; IDA:FlyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008310; F:single-stranded DNA specific 3'-5' exodeoxyribonuclease activity; IDA:FlyBase.
									GO:0000737; P:DNA catabolic process, endonucleolytic; IDA:FlyBase.::GO:0000738; P:DNA catabolic process, exonucleolytic; IDA:FlyBase.::GO:0006302; P:double-strand break repair; IMP:FlyBase.
193	A0RU95	340	FEN_CENSY Flap endonuclease 1 OS=Cenarchaeum ...	150	0.0000000002	67.4	29	49
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
194	P39875	702	EXO1_YEAST Exodeoxyribonuclease 1 OS=Saccharo...	186	0.002	45.8	22	39	GO:0005634; C:nucleus; IPI:SGD.
									GO:0008409; F:5'-3' exonuclease activity; IDA:SGD.::GO:0017108; F:5'-flap endonuclease activity; IDA:SGD.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
									GO:0031292; P:gene conversion at mating-type locus, DNA double-strand break processing; IMP:SGD.::GO:0000706; P:meiotic DNA double-strand break processing; IGI:SGD.::GO:0006298; P:mismatch repair; IMP:SGD.::GO:0031860; P:telomeric 3' overhang formation; IGI:SGD.
195	Q6GZN0	363	095R_FRG3G Putative RAD2-like endonuclease 09...	178	0.0000000002	67.4	24	48	GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:InterPro.
196	B1L6R9	342	FEN_KORCO Flap endonuclease 1 OS=Korarchaeum ...	86	0.00006	50.1	36	50
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
197	B8C6S5	390	FEN1_THAPS Flap endonuclease 1 OS=Thalassiosi...	128	0.025	42	31	52	GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
198	A7AX58	672	FEN1_BABBO Flap endonuclease 1 OS=Babesia bov...	115	0.000001	56.2	33	50	GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
199	Q2FNC9	333	FEN_METHJ Flap endonuclease 1 OS=Methanospiri...	106	0.000000002	63.9	37	55
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
200	A3CWV2	333	FEN_METMJ Flap endonuclease 1 OS=Methanoculle...	87	0.0000000007	65.5	41	56
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
201	A9A4B0	340	FEN_NITMS Flap endonuclease 1 OS=Nitrosopumil...	81	0.000000004	63.2	40	58
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
202	Q12086	430	DIN7_YEAST DNA damage-inducible protein DIN7 ...	110	7.8	33.9	25	44	GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IDA:SGD.
203	Q29FC1	754	GEN_DROPS Flap endonuclease GEN OS=Drosophila...	112	0.000001	56.6	29	47	GO:0005634; C:nucleus; ISS:UniProtKB.
									GO:0035312; F:5'-3' exodeoxyribonuclease activity; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008311; F:double-stranded DNA specific 3'-5' exodeoxyribonuclease activity; ISS:UniProtKB.::GO:0004520; F:endodeoxyribonuclease activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008310; F:single-stranded DNA specific 3'-5' exodeoxyribonuclease activity; ISS:UniProtKB.
									GO:0000737; P:DNA catabolic process, endonucleolytic; ISS:UniProtKB.::GO:0000738; P:DNA catabolic process, exonucleolytic; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
204	Q8L6Z7	735	EXO1_ARATH Exonuclease 1 OS=Arabidopsis thali...	122	0.0002	48.9	26	46	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
205	A7IA59	333	FEN_METB6 Flap endonuclease 1 OS=Methanoregul...	141	0.000000008	62	28	48
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
206	Q91FF5	415	VF369_IIV6 Probable RAD2-like endonuclease 36...	91	0.65	37.4	25	49	GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:InterPro.
207	P53695	571	EXO1_SCHPO Exodeoxyribonuclease 1 OS=Schizosa...	104	0.000005	54.3	27	46	GO:0005634; C:nucleus; IDA:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
									GO:0008409; F:5'-3' exonuclease activity; IMP:PomBase.::GO:0017108; F:5'-flap endonuclease activity; ISS:PomBase.::GO:0003690; F:double-stranded DNA binding; IDA:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0043570; P:maintenance of DNA repeat elements; IMP:PomBase.::GO:0000706; P:meiotic DNA double-strand break processing; TAS:PomBase.::GO:0006298; P:mismatch repair; IMP:PomBase.::GO:0006312; P:mitotic recombination; TAS:PomBase.::GO:0000723; P:telomere maintenance; TAS:PomBase.
208	A1RWY2	346	FEN_THEPD Flap endonuclease 1 OS=Thermofilum ...	148	0.0000001	58.5	25	49
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
209	Q60GC1	836	EXO1_ORYSJ Exonuclease 1 OS=Oryza sativa subs...	109	0.0003	48.9	28	49	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
210	P40028	759	YEN1_YEAST Holliday junction resolvase YEN1 O...	134	0.00000005	60.8	33	51	GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
									GO:0008821; F:crossover junction endodeoxyribonuclease activity; IDA:SGD.::GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IGI:SGD.
211	Q5V5T7	326	FEN_HALMA Flap endonuclease 1 OS=B-1809) (Hal...	99	0.0009	46.2	31	51
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.

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