rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
481 | Q5AHI7 | 454 | NOP12_CANAL Nucleolar protein 12 OS=Candida a... | 139 | 0.76 | 37 | 28 | 41 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 482 | P84104 | 164 | SRSF3_MOUSE Serine/arginine-rich splicing fac... | 84 | 0.78 | 35.4 | 26 | 52 | GO:0016607; C:nuclear speck; IDA:BHF-UCL. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0043274; F:phospholipase binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; TAS:BHF-UCL. | | | | | | | | | | GO:0008286; P:insulin receptor signaling pathway; TAS:BHF-UCL.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; TAS:BHF-UCL. | 483 | P84103 | 164 | SRSF3_HUMAN Serine/arginine-rich splicing fac... | 84 | 0.78 | 35.4 | 26 | 52 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 484 | Q3SZR8 | 164 | SRSF3_BOVIN Serine/arginine-rich splicing fac... | 84 | 0.78 | 35.4 | 26 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 485 | Q10355 | 219 | YDB2_SCHPO Uncharacterized RNA-binding protei... | 65 | 0.78 | 36.2 | 28 | 55 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007126; P:meiosis; IEP:PomBase. | 486 | Q0WW84 | 435 | RB47B_ARATH Polyadenylate-binding protein RBP... | 91 | 3.3 | 34.7 | 29 | 42 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 487 | P17130 | 365 | ROA1_XENLA Heterogeneous nuclear ribonucleopr... | 47 | 0.82 | 36.6 | 32 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 488 | Q3KPW1 | 283 | RNP1B_XENLA RNA-binding protein with serine-r... | 48 | 0.86 | 36.2 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 489 | Q5XG24 | 283 | RNP1A_XENLA RNA-binding protein with serine-r... | 48 | 0.86 | 36.2 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 490 | Q923K9 | 594 | A1CF_RAT APOBEC1 complementation factor OS=Ra... | 96 | 0.88 | 36.6 | 31 | 48 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005720; C:nuclear heterochromatin; IDA:RGD. | | | | | | | | | | GO:0004131; F:cytosine deaminase activity; IDA:RGD.::GO:0003729; F:mRNA binding; IDA:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0016554; P:cytidine to uridine editing; TAS:HGNC.::GO:0016556; P:mRNA modification; IMP:RGD.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB. | 491 | Q28E41 | 309 | RNPS1_XENTR RNA-binding protein with serine-r... | 48 | 0.89 | 36.2 | 33 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 492 | Q55FQ0 | 459 | RU17_DICDI U1 small nuclear ribonucleoprotein... | 104 | 0.9 | 36.6 | 26 | 44 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB.::GO:0005685; C:U1 snRNP; ISS:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 493 | Q8K3P4 | 362 | MSI1H_RAT RNA-binding protein Musashi homolog... | 48 | 0.92 | 36.2 | 29 | 63 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030855; P:epithelial cell differentiation; IEP:RGD.::GO:0009725; P:response to hormone stimulus; IMP:RGD. | 494 | O74978 | 276 | YQL5_SCHPO Uncharacterized RNA-binding protei... | 111 | 0.92 | 36.2 | 21 | 44 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; ISS:PomBase. | 495 | Q93W34 | 415 | RP45C_ARATH Polyadenylate-binding protein RBP... | 74 | 2.8 | 35 | 24 | 53 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 496 | Q61474 | 362 | MSI1H_MOUSE RNA-binding protein Musashi homol... | 48 | 0.96 | 36.2 | 29 | 63 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005844; C:polysome; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:MGI. | | | | | | | | | | | 497 | P55884 | 814 | EIF3B_HUMAN Eukaryotic translation initiation... | 57 | 0.97 | 36.6 | 32 | 54 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0032947; F:protein complex scaffold; TAS:UniProtKB.::GO:0003743; F:translation initiation factor activity; IDA:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; IDA:UniProtKB. | 498 | Q27W01 | 174 | RBM8A_RAT RNA-binding protein 8A OS=Rattus no... | 74 | 1 | 35.4 | 24 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 499 | Q9Y5S9 | 174 | RBM8A_HUMAN RNA-binding protein 8A OS=Homo sa... | 74 | 1 | 35.4 | 24 | 53 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0035145; C:exon-exon junction complex; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003729; F:mRNA binding; NAS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IMP:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 500 | Q3ZCE8 | 174 | RBM8A_BOVIN RNA-binding protein 8A OS=Bos tau... | 74 | 1 | 35.4 | 24 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 501 | O14327 | 166 | PAB2_SCHPO Polyadenylate-binding protein 2 OS... | 71 | 1 | 35 | 30 | 52 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:PomBase. | 502 | Q9CWZ3 | 174 | RBM8A_MOUSE RNA-binding protein 8A OS=Mus mus... | 74 | 1 | 35.4 | 24 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 503 | Q19706 | 256 | EIF3G_CAEEL Eukaryotic translation initiation... | 59 | 1.1 | 35.8 | 31 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase. | 504 | Q20870 | 499 | DAZ1_CAEEL DAZ protein 1 OS=Caenorhabditis el... | 71 | 1.1 | 36.2 | 34 | 49 | GO:0005737; C:cytoplasm; IDA:WormBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 505 | Q7QJV0 | 271 | EIF3G_ANOGA Eukaryotic translation initiation... | 62 | 1.2 | 35.8 | 27 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 506 | Q54J05 | 241 | RU2B_DICDI U2 small nuclear ribonucleoprotein... | 57 | 1.2 | 35.4 | 39 | 53 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 507 | Q1HE01 | 154 | NCBP2_BOMMO Nuclear cap-binding protein subun... | 63 | 1.3 | 34.7 | 32 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 508 | B4PP90 | 273 | EI3G2_DROYA Eukaryotic translation initiation... | 74 | 1.3 | 35.8 | 23 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 509 | Q5XPJ9 | 1399 | SCAR2_ARATH Protein SCAR2 OS=Arabidopsis thal... | 25 | 1.3 | 36.2 | 60 | 72 | GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0031209; C:SCAR complex; TAS:TAIR. | | | | | | | | | | GO:0003779; F:actin binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045010; P:actin nucleation; TAS:TAIR.::GO:0016337; P:cell-cell adhesion; IMP:TAIR.::GO:0051127; P:positive regulation of actin nucleation; IMP:TAIR.::GO:0010091; P:trichome branching; IMP:TAIR. | 510 | Q4PC17 | 858 | MRD1_USTMA Multiple RNA-binding domain-contai... | 100 | 1.3 | 36.2 | 29 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 511 | P09651 | 372 | ROA1_HUMAN Heterogeneous nuclear ribonucleopr... | 47 | 1.3 | 35.8 | 32 | 57 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HGNC.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; IDA:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; IDA:HGNC.::GO:0003727; F:single-stranded RNA binding; IC:HGNC. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0051170; P:nuclear import; IDA:HGNC.::GO:0006405; P:RNA export from nucleus; IC:HGNC. |