Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR200C
Length:
788
Number of sequences:
5887
Description:
YGR200C ELP2 SGDID:S000003432, Chr VII from 902270-899904, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; target of Kluyveromyces lactis zymocin"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...4090.15     39.3     20     36GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
242A7RWD2    327   CIAO1_NEMVE Probable cytosolic iron-sulfur pr...1290.15     38.9     28     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
243Q3ZCC9    322   SEC13_BOVIN Protein SEC13 homolog OS=Bos taur...1110.15     38.9     23     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
244P53196    417   RPN14_YEAST 26S proteasome regulatory subunit...750.15     38.9     29     55GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
245Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...1350.16     38.9     28     44GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
246P38129    798   TAF5_YEAST Transcription initiation factor TF...760.16     39.3     29     45GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.::GO:0005669; C:transcription factor TFIID complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032947; F:protein complex scaffold; IMP:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IC:SGD.
247Q0CHM0    309   SEC13_ASPTN Protein transport protein sec13 O...1150.16     38.5     25     47GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
248Q95RJ9    700   EBI_DROME F-box-like/WD repeat-containing pro...2390.16     39.3     23     38GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0017053; C:transcriptional repressor complex; IGI:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0070491; F:repressing transcription factor binding; IPI:FlyBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0042676; P:compound eye cone cell fate commitment; TAS:FlyBase.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IPI:GOC.::GO:0007219; P:Notch signaling pathway; TAS:FlyBase.::GO:0042461; P:photoreceptor cell development; IMP:FlyBase.::GO:0031065; P:positive regulation of histone deacetylation; IDA:FlyBase.::GO:0045572; P:positive regulation of imaginal disc growth; IMP:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IDA:FlyBase.::GO:0042058; P:regulation of epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.::GO:0035220; P:wing disc development; IMP:FlyBase.
249O94527    809   YBU3_SCHPO Uncharacterized WD repeat-containi...1160.16     39.3     26     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
250Q6TMK6    340   GBB1_CRIGR Guanine nucleotide-binding protein...2840.16     38.9     23     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
251Q4V7Y7    655   KTNB1_XENLA Katanin p80 WD40-containing subun...1370.17     38.9     26     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
252Q74ZN0    825   HIR1_ASHGO Protein HIR1 OS=Y-1056) (Yeast) (E...1530.17     39.3     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
253C7GWC1    494   LIS1_YEAS2 Nuclear distribution protein PAC1 ...2140.17     38.9     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
254P39946    494   LIS1_YEAST Nuclear distribution protein PAC1 ...2140.17     38.9     25     39GO:0005881; C:cytoplasmic microtubule; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051010; F:microtubule plus-end binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030473; P:nuclear migration along microtubule; IMP:SGD.
255A6ZPA6    494   LIS1_YEAS7 Nuclear distribution protein PAC1 ...2140.17     38.9     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
256B3LJT5    494   LIS1_YEAS1 Nuclear distribution protein PAC1 ...2140.17     38.9     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
257B4HWV6    420   WDR12_DROSE Ribosome biogenesis protein WDR12...2250.17     38.9     22     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
258Q920M5    471   CORO6_MOUSE Coronin-6 OS=Mus musculus (Mouse)...870.17     38.9     32     53GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
259Q6PJI9    974   WDR59_HUMAN WD repeat-containing protein 59 O...2680.18     39.3     19     38
260O45487    891   EMAL_CAEEL Echinoderm microtubule-associated ...890.18     39.3     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030425; C:dendrite; IDA:WormBase.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031594; C:neuromuscular junction; IDA:WormBase.::GO:0043025; C:neuronal cell body; IDA:WormBase.
GO:0018991; P:oviposition; IMP:WormBase.
261Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...770.18     38.9     30     48
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
262Q8NBT0    407   POC1A_HUMAN POC1 centriolar protein homolog A...3030.19     38.5     19     36GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
263Q96DI7    357   SNR40_HUMAN U5 small nuclear ribonucleoprotei...770.19     38.5     27     48GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005732; C:small nucleolar ribonucleoprotein complex; NAS:UniProtKB.::GO:0005682; C:U5 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
264O43071    558   PRP17_SCHPO Pre-mRNA-processing factor 17 OS=...800.19     38.9     34     53GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
265O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...390.19     38.9     46     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
266C7J8E5    1218   RTOR2_ORYSJ Regulatory-associated protein of ...910.19     38.9     26     47
GO:0005488; F:binding; IEA:InterPro.
267Q0IQN5    1359   RTOR1_ORYSJ Regulatory-associated protein of ...910.19     38.9     26     47
GO:0005488; F:binding; IEA:InterPro.
268Q54QU5    359   WDR89_DICDI WD repeat-containing protein 89 h...740.19     38.5     30     50
269Q91WQ5    589   TAF5L_MOUSE TAF5-like RNA polymerase II p300/...580.2     38.9     34     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
270B9WHJ2    380   CIAO1_CANDC Probable cytosolic iron-sulfur pr...1350.2     38.5     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
271Q8K4P0    1330   WDR33_MOUSE pre-mRNA 3' end processing protei...1300.2     38.9     23     45GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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