Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR195W
Length:
246
Number of sequences:
5887
Description:
YGR195W SKI6 SGDID:S000003427, Chr VII from 888882-889622, Genome Release 64-1-1, Verified ORF, "Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391C3PA74    245   RNPH_BACAA Ribonuclease PH OS=Bacillus anthra...1850.0007     43.5     26     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
392B4U8T3    255   RNPH_HYDS0 Ribonuclease PH OS=Hydrogenobaculu...2450.0007     43.5     23     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
393Q8YP11    718   PNP_NOSS1 Polyribonucleotide nucleotidyltrans...2490.0007     43.9     27     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
394B1YJW6    250   RNPH_EXIS2 Ribonuclease PH OS=Exiguobacterium...1970.0007     43.5     26     44
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
395Q2YXP2    698   PNP_STAAB Polyribonucleotide nucleotidyltrans...2140.0009     43.9     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
396B4S5G5    734   PNP_PROA2 Polyribonucleotide nucleotidyltrans...2310.001     43.9     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
397Q9AC32    712   PNP_CAUCR Polyribonucleotide nucleotidyltrans...2010.001     43.9     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
398B8GWZ0    712   PNP_CAUCN Polyribonucleotide nucleotidyltrans...2010.001     43.9     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
399A6WWW1    713   PNP_OCHA4 Polyribonucleotide nucleotidyltrans...1580.001     43.5     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
400Q74C79    238   RNPH_GEOSL Ribonuclease PH OS=Geobacter sulfu...1940.001     43.1     26     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
401Q3M7Z9    718   PNP_ANAVT Polyribonucleotide nucleotidyltrans...1660.001     43.5     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
402A2C412    722   PNP_PROM1 Polyribonucleotide nucleotidyltrans...1650.001     43.5     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
403A1S2C5    237   RNPH_SHEAM Ribonuclease PH OS=Shewanella amaz...1640.001     42.7     24     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
404Q7U9I1    249   RNPH_SYNPX Ribonuclease PH OS=Synechococcus s...2200.001     42.7     27     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
405B1ZS98    730   PNP_OPITP Polyribonucleotide nucleotidyltrans...1650.001     43.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
406Q9K8D8    257   RNPH_BACHD Ribonuclease PH OS=9153 / C-125). ...2050.001     42.7     24     44
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
407C6E2P5    696   PNP_GEOSM Polyribonucleotide nucleotidyltrans...2050.001     43.5     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
408B5EI63    696   PNP_GEOBB Polyribonucleotide nucleotidyltrans...2050.001     43.5     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
409A4XL64    701   PNP_CALS8 Polyribonucleotide nucleotidyltrans...1610.001     43.5     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
410Q16D02    237   RNPH_ROSDO Ribonuclease PH OS=sp. (strain OCh...1880.001     42.7     24     44
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
411Q8EQT7    705   PNP_OCEIH Polyribonucleotide nucleotidyltrans...2590.001     43.1     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
412Q39VA1    697   PNP_GEOMG Polyribonucleotide nucleotidyltrans...2050.001     43.1     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
413Q1LQ38    238   RNPH_RALME Ribonuclease PH OS=Ralstonia metal...1140.001     42.4     25     44
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
414Q1GWJ5    238   RNPH_SPHAL Ribonuclease PH OS=(Sphingomonas a...1860.001     42.4     25     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
415Q2NQT7    239   RNPH_SODGM Ribonuclease PH OS=Sodalis glossin...1100.002     42.4     28     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
416A9B8G1    777   PNP_HERA2 Polyribonucleotide nucleotidyltrans...2080.002     43.1     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
417A3DCH7    700   PNP_CLOTH Polyribonucleotide nucleotidyltrans...2080.002     43.1     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
418Q12SG2    237   RNPH_SHEDO Ribonuclease PH OS=Shewanella deni...1660.002     42.4     26     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
419Q5SJ75    713   PNP_THET8 Polyribonucleotide nucleotidyltrans...2320.002     42.7     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
420Q9ZAE1    713   PNP_THETH Polyribonucleotide nucleotidyltrans...2320.002     42.7     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
421Q72JJ8    713   PNP_THET2 Polyribonucleotide nucleotidyltrans...2320.002     42.7     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 1000 391 - 420
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::