Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR195W
Length:
246
Number of sequences:
5887
Description:
YGR195W SKI6 SGDID:S000003427, Chr VII from 888882-889622, Genome Release 64-1-1, Verified ORF, "Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211B2VF76    238   RNPH_ERWT9 Ribonuclease PH OS=Erwinia tasmani...1900.00002     47.8     26     44
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
212Q9KVD6    238   RNPH_VIBCH Ribonuclease PH OS=Vibrio cholerae...1920.00002     47.8     27     45
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
213Q8XXF5    238   RNPH_RALSO Ribonuclease PH OS=Ralstonia solan...2410.00003     47.8     23     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
214P0CG18    238   RNPH_ECOBW Ribonuclease PH OS=Escherichia col...1890.00003     47.8     25     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
215B3PZA2    239   RNPH_RHIE6 Ribonuclease PH OS=Rhizobium etli ...1940.00003     47.8     24     45
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
216Q5P5J6    239   RNPH_AROAE Ribonuclease PH OS=Aromatoleum aro...1890.00003     47.8     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
217Q8P5T5    241   RNPH_XANCP Ribonuclease PH OS=LMG 568). GN=rp...1910.00003     47.8     25     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
218B0RP96    241   RNPH_XANCB Ribonuclease PH OS=Xanthomonas cam...1910.00003     47.8     25     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
219Q4UY39    241   RNPH_XANC8 Ribonuclease PH OS=Xanthomonas cam...1910.00003     47.8     25     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
220A6WVA9    238   RNPH_OCHA4 Ribonuclease PH OS=Ochrobactrum an...1910.00003     47.8     25     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
221Q8BTW3    273   EXOS6_MOUSE Exosome complex component MTR3 OS...1580.00003     47.8     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045190; P:isotype switching; IMP:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
222B1I4W9    261   RNPH_DESAP Ribonuclease PH OS=Desulforudis au...1920.00003     47.8     26     46
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
223A8ARN1    238   RNPH_CITK8 Ribonuclease PH OS=Citrobacter kos...1890.00003     47.4     25     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
224B2SLL1    241   RNPH_XANOP Ribonuclease PH OS=Xanthomonas ory...1950.00003     47.4     25     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
225Q2P6N2    241   RNPH_XANOM Ribonuclease PH OS=Xanthomonas ory...1950.00003     47.4     25     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
226A5WHJ0    238   RNPH_PSYWF Ribonuclease PH OS=Psychrobacter s...2190.00003     47.4     26     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
227Q2KDA1    239   RNPH_RHIEC Ribonuclease PH OS=Rhizobium etli ...1940.00003     47.4     24     44
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
228B2JEI0    246   RNPH_BURP8 Ribonuclease PH OS=Burkholderia ph...1860.00003     47.4     25     41
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
229P28619    245   RNPH_BACSU Ribonuclease PH OS=Bacillus subtil...1990.00003     47.4     30     45
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0031125; P:rRNA 3'-end processing; IMP:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
230Q8G2Y5    238   RNPH_BRUSU Ribonuclease PH OS=Brucella suis b...1910.00004     47.4     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
231Q2RL40    250   RNPH_MOOTA Ribonuclease PH OS=Moorella thermo...1960.00004     47.4     27     46
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
232Q7MBD4    238   RNPH_CHRVO Ribonuclease PH OS=NBRC 12614 / NC...1820.00004     47     26     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
233Q7MPT3    238   RNPH_VIBVY Ribonuclease PH OS=Vibrio vulnific...1890.00004     47     24     45
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
234Q8DDX4    238   RNPH_VIBVU Ribonuclease PH OS=Vibrio vulnific...1890.00004     47     24     45
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
235Q6DAW2    238   RNPH_ERWCT Ribonuclease PH OS=BAA-672) (Pecto...1910.00005     47     26     42
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
236B0CJ32    238   RNPH_BRUSI Ribonuclease PH OS=Brucella suis (...1910.00005     47     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
237A5VNA8    238   RNPH_BRUO2 Ribonuclease PH OS=Brucella ovis (...1910.00005     47     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
238A9M7B8    238   RNPH_BRUC2 Ribonuclease PH OS=Brucella canis ...1910.00005     47     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
239Q57FK3    238   RNPH_BRUAB Ribonuclease PH OS=Brucella abortu...1910.00005     47     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
240Q2YP33    238   RNPH_BRUA2 Ribonuclease PH OS=Brucella abortu...1910.00005     47     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
241B2S8G4    238   RNPH_BRUA1 Ribonuclease PH OS=Brucella abortu...1910.00005     47     24     43
GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
records
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