UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YGR195W

Length:

246

Number of sequences:

5887

Description:

YGR195W SKI6 SGDID:S000003427, Chr VII from 888882-889622, Genome Release 64-1-1, Verified ORF, "Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
121	B6EPI9	238	RNPH_ALISL Ribonuclease PH OS=LFI1238)). GN=r...	190	0.0000003	53.1	27	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
122	Q8UIG8	238	RNPH_AGRT5 Ribonuclease PH OS=Agrobacterium t...	233	0.0000003	53.1	24	42
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
123	Q3SW80	237	RNPH_NITWN Ribonuclease PH OS=Nitrobacter win...	211	0.0000004	53.1	25	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
124	A5UAL6	238	RNPH_HAEIE Ribonuclease PH OS=Haemophilus inf...	189	0.0000004	52.8	26	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
125	C1DCK5	238	RNPH_LARHH Ribonuclease PH OS=Laribacter hong...	227	0.0000004	52.8	25	45
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
126	Q39IL4	243	RNPH_BURS3 Ribonuclease PH OS=/ NCIB 9086 / R...	216	0.0000005	52.8	26	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
127	B9J7T9	238	RNPH_AGRRK Ribonuclease PH OS=Agrobacterium r...	194	0.0000006	52.4	26	45
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
128	B3PGE8	239	RNPH_CELJU Ribonuclease PH OS=cellulosa). GN=...	190	0.0000007	52.4	27	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
129	B0KQ94	240	RNPH_PSEPG Ribonuclease PH OS=Pseudomonas put...	189	0.0000008	52.4	28	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
130	B4F0W3	238	RNPH_PROMH Ribonuclease PH OS=Proteus mirabil...	192	0.0000009	52	27	45
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
131	A1WVN7	238	RNPH_HALHL Ribonuclease PH OS=halophila (stra...	189	0.000001	52	24	42
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
132	C0ZAF8	253	RNPH_BREBN Ribonuclease PH OS=Brevibacillus b...	228	0.000001	52	25	45
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
133	A5UG91	238	RNPH_HAEIG Ribonuclease PH OS=Haemophilus inf...	189	0.000001	51.6	26	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
134	Q1Q8S2	238	RNPH_PSYCK Ribonuclease PH OS=Psychrobacter c...	221	0.000001	51.6	26	41
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
135	Q1QRU5	237	RNPH_NITHX Ribonuclease PH OS=Nitrobacter ham...	210	0.000001	51.6	24	42
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
136	Q4FQJ5	238	RNPH_PSYA2 Ribonuclease PH OS=Psychrobacter a...	221	0.000001	51.6	26	41
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
137	C0QHM6	695	PNP_DESAH Polyribonucleotide nucleotidyltrans...	206	0.000001	52.4	26	45	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
138	P44444	238	RNPH_HAEIN Ribonuclease PH OS=Haemophilus inf...	189	0.000001	51.6	26	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
139	Q4QNR6	238	RNPH_HAEI8 Ribonuclease PH OS=Haemophilus inf...	189	0.000001	51.6	26	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
140	B2T6B5	246	RNPH_BURPP Ribonuclease PH OS=Burkholderia ph...	186	0.000002	51.6	26	41
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
141	B1M4N1	237	RNPH_METRJ Ribonuclease PH OS=2831). GN=rph O...	167	0.000002	51.2	26	42
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
142	A1KCM3	239	RNPH_AZOSB Ribonuclease PH OS=Azoarcus sp. (s...	189	0.000002	51.2	26	43
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
143	Q92SK2	239	RNPH_RHIME Ribonuclease PH OS=meliloti). GN=r...	191	0.000002	51.2	25	45
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
144	Q1MMD1	239	RNPH_RHIL3 Ribonuclease PH OS=Rhizobium legum...	194	0.000002	51.2	25	45
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
145	Q8F7J8	698	PNP_LEPIN Polyribonucleotide nucleotidyltrans...	242	0.000002	52	24	45	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
146	Q72NX7	698	PNP_LEPIC Polyribonucleotide nucleotidyltrans...	242	0.000002	52	24	45	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
147	Q3J8F0	239	RNPH_NITOC Ribonuclease PH OS=Nitrosococcus o...	188	0.000002	51.2	24	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
148	B6JCH9	238	RNPH_OLICO Ribonuclease PH OS=Oligotropha car...	191	0.000002	51.2	27	43
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
149	Q1GXA4	238	RNPH_METFK Ribonuclease PH OS=Methylobacillus...	190	0.000002	51.2	27	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
150	B0TQK4	237	RNPH_SHEHH Ribonuclease PH OS=Shewanella hali...	162	0.000002	50.8	27	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
151	A8H9B7	237	RNPH_SHEPA Ribonuclease PH OS=Shewanella peal...	162	0.000002	50.8	27	44
									GO:0000049; F:tRNA binding; IEA:InterPro.::GO:0009022; F:tRNA nucleotidyltransferase activity; IEA:EC.::GO:0004549; F:tRNA-specific ribonuclease activity; IEA:InterPro.
									GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.

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