Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR186W
Length:
735
Number of sequences:
5887
Description:
YGR186W TFG1 SGDID:S000003418, Chr VII from 867774-869981, Genome Release 64-1-1, Verified ORF, "TFIIF (Transcription Factor II) largest subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP74"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P41895    735   T2FA_YEAST Transcription initiation factor II...7350     1504     100     100GO:0005674; C:transcription factor TFIIF complex; IDA:SGD.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0000991; F:core RNA polymerase II binding transcription factor activity; IDA:SGD.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0072542; F:protein phosphatase activator activity; IDA:SGD.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0001111; P:promoter clearance from RNA polymerase II promoter; IC:SGD.::GO:0080163; P:regulation of protein serine/threonine phosphatase activity; IDA:SGD.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IC:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0001174; P:transcriptional start site selection at RNA polymerase II promoter; IMP:SGD.
2O94416    540   T2FA_SCHPO Transcription initiation factor II...460.082     40     35     59GO:0005829; C:cytosol; IDA:PomBase.::GO:0005674; C:transcription factor TFIIF complex; ISS:PomBase.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:PomBase.
3Q9SU25    649   T2FA_ARATH Transcription initiation factor II...850.0000001     58.5     35     53GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
4Q54WV4    556   T2FA_DICDI General transcription factor IIF s...720.0000007     56.2     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
5P72749    597   TYPA_SYNY3 GTP-binding protein TypA/BipA homo...860.2     38.5     30     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.
6Q04870    524   T2FA_XENLA General transcription factor IIF s...1060.54     37.4     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
7B2V8C9    211   GRPE_SULSY Protein grpE OS=Sulfurihydrogenibi...810.78     35.8     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000774; F:adenyl-nucleotide exchange factor activity; IEA:InterPro.::GO:0051087; F:chaperone binding; IEA:InterPro.::GO:0042803; F:protein homodimerization activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
8Q29W20    540   EGR1_BOVIN Early growth response protein 1 OS...981.5     35.8     30     41GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0071504; P:cellular response to heparin; ISS:UniProtKB.::GO:0071506; P:cellular response to mycophenolic acid; ISS:UniProtKB.::GO:0072110; P:glomerular mesangial cell proliferation; ISS:UniProtKB.::GO:0072303; P:positive regulation of glomerular metanephric mesangial cell proliferation; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9B0TY94    111   Y120_FRAP2 UPF0133 protein Fphi_0115 OS=Franc...883.6     32.3     28     51
10P44033    343   Y665_HAEIN Putative kinase HI_0665 OS=Haemoph...1383.7     34.3     23     45
GO:0016301; F:kinase activity; IEA:UniProtKB-KW.
11O94225    474   HOSM_PENCW Homocitrate synthase, mitochondria...756.6     33.5     31     48GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0004410; F:homocitrate synthase activity; IEA:EC.
GO:0009085; P:lysine biosynthetic process; IEA:UniProtKB-KW.
12B2SGS9    112   Y1023_FRATM UPF0133 protein FTM_1023 OS=Franc...848.5     31.6     26     54
records
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