Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR178C
Length:
722
Number of sequences:
5887
Description:
YGR178C PBP1 SGDID:S000003410, Chr VII from 853215-851047, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; similar to human ataxin-2; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53297    722   PBP1_YEAST PAB1-binding protein 1 OS=Saccharo...7220     1491     100     100GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0005844; C:polysome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006378; P:mRNA polyadenylation; IGI:SGD.::GO:0045727; P:positive regulation of translation; IMP:SGD.::GO:0034063; P:stress granule assembly; IMP:SGD.
2Q9USW1    791   YHZ3_SCHPO Uncharacterized protein C21B10.03c...2602e-36     150     38     55GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005634; C:nucleus; ISS:PomBase.
GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000765; P:regulation of cytoplasmic translation; ISS:PomBase.
3Q55DE7    1103   ATX2_DICDI Ataxin-2 homolog OS=Dictyostelium ...2544e-22     105     30     50
GO:0005488; F:binding; IEA:InterPro.
4Q7TQH0    1049   ATX2L_MOUSE Ataxin-2-like protein OS=Mus musc...2630.0000000002     67.8     25     44GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
5Q8WWM7    1075   ATX2L_HUMAN Ataxin-2-like protein OS=Homo sap...2630.0000000003     67.4     25     44GO:0016020; C:membrane; IDA:MGI.
6Q99700    1313   ATX2_HUMAN Ataxin-2 OS=Homo sapiens (Human). ...2970.00000001     62     24     42GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.::GO:0005844; C:polysome; IDA:UniProtKB.::GO:0005802; C:trans-Golgi network; IDA:UniProtKB.
GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0033962; P:cytoplasmic mRNA processing body assembly; IMP:UniProtKB.::GO:0006417; P:regulation of translation; NAS:UniProtKB.::GO:0016070; P:RNA metabolic process; NAS:UniProtKB.::GO:0050658; P:RNA transport; NAS:UniProtKB.::GO:0034063; P:stress granule assembly; IMP:UniProtKB.
7O70305    1285   ATX2_MOUSE Ataxin-2 OS=Mus musculus (Mouse). ...2970.00000003     60.8     24     41GO:0048471; C:perinuclear region of cytoplasm; IDA:MGI.
GO:0021702; P:cerebellar Purkinje cell differentiation; IMP:MGI.::GO:0048872; P:homeostasis of number of cells; IMP:MGI.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:MGI.::GO:0050905; P:neuromuscular process; IMP:MGI.::GO:0048812; P:neuron projection morphogenesis; IMP:MGI.
8Q29A33    1121   ATX2_DROPS Ataxin-2 homolog OS=Drosophila pse...1360.0004     47.8     35     49GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0022416; P:chaeta development; ISS:UniProtKB.::GO:0048749; P:compound eye development; ISS:UniProtKB.::GO:0009994; P:oocyte differentiation; ISS:UniProtKB.::GO:0030833; P:regulation of actin filament polymerization; ISS:UniProtKB.
9Q8SWR8    1084   ATX2_DROME Ataxin-2 homolog OS=Drosophila mel...1400.0004     47.4     36     49GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0022416; P:chaeta development; IMP:UniProtKB.::GO:0048749; P:compound eye development; IMP:UniProtKB.::GO:0009994; P:oocyte differentiation; IMP:UniProtKB.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0030833; P:regulation of actin filament polymerization; IMP:UniProtKB.
10C3LMH4    336   PYRD_VIBCM Dihydroorotate dehydrogenase (quin...950.28     37.7     31     44GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004158; F:dihydroorotate oxidase activity; IEA:InterPro.
GO:0006207; P:'de novo' pyrimidine base biosynthetic process; IEA:InterPro.::GO:0006222; P:UMP biosynthetic process; IEA:InterPro.
11Q9KRZ2    336   PYRD_VIBCH Dihydroorotate dehydrogenase (quin...950.28     37.7     31     44GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004158; F:dihydroorotate oxidase activity; IEA:InterPro.
GO:0006207; P:'de novo' pyrimidine base biosynthetic process; IEA:InterPro.::GO:0006222; P:UMP biosynthetic process; IEA:InterPro.
12A5F839    336   PYRD_VIBC3 Dihydroorotate dehydrogenase (quin...950.28     37.7     31     44GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004158; F:dihydroorotate oxidase activity; IEA:InterPro.
GO:0006207; P:'de novo' pyrimidine base biosynthetic process; IEA:InterPro.::GO:0006222; P:UMP biosynthetic process; IEA:InterPro.
13Q7MKX3    336   PYRD_VIBVY Dihydroorotate dehydrogenase (quin...970.41     37.4     30     39GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004158; F:dihydroorotate oxidase activity; IEA:InterPro.
GO:0006207; P:'de novo' pyrimidine base biosynthetic process; IEA:InterPro.::GO:0006222; P:UMP biosynthetic process; IEA:InterPro.
14Q8D9G5    336   PYRD_VIBVU Dihydroorotate dehydrogenase (quin...970.45     37.4     30     39GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004158; F:dihydroorotate oxidase activity; IEA:InterPro.
GO:0006207; P:'de novo' pyrimidine base biosynthetic process; IEA:InterPro.::GO:0006222; P:UMP biosynthetic process; IEA:InterPro.
15A4IH82    373   3BP5L_XENTR SH3 domain-binding protein 5-like...780.94     36.2     23     51
16A1SX25    336   PYRD_PSYIN Dihydroorotate dehydrogenase (quin...851     36.2     33     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004158; F:dihydroorotate oxidase activity; IEA:InterPro.
GO:0006207; P:'de novo' pyrimidine base biosynthetic process; IEA:InterPro.::GO:0006222; P:UMP biosynthetic process; IEA:InterPro.
17C0R2S8    288   ISPE_WOLWR 4-diphosphocytidyl-2-C-methyl-D-er...831.3     35.4     35     49
GO:0050515; F:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.
18P20930    4061   FILA_HUMAN Filaggrin OS=Homo sapiens (Human)....1131.9     35.8     30     46GO:0016023; C:cytoplasmic membrane-bounded vesicle; IDA:UniProtKB.::GO:0005882; C:intermediate filament; NAS:UniProtKB.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005198; F:structural molecule activity; NAS:UniProtKB.
GO:0030216; P:keratinocyte differentiation; TAS:BHF-UCL.
19Q73I23    288   ISPE_WOLPM 4-diphosphocytidyl-2-C-methyl-D-er...833.1     34.3     35     48
GO:0050515; F:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.
20Q8NCM8    4307   DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain ...2085.8     34.3     22     38GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005794; C:Golgi apparatus; IDA:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0007030; P:Golgi organization; IDA:UniProtKB.::GO:0007018; P:microtubule-based movement; IEA:InterPro.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
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