Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR167W
Length:
233
Number of sequences:
5887
Description:
YGR167W CLC1 SGDID:S000003399, Chr VII from 832456-833157, Genome Release 64-1-1, Verified ORF, "Clathrin light chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; thought to regulate clathrin function; two Clathrin heavy chains (CHC1) form the clathrin triskelion structural component"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P17891    233   CLC1_YEAST Clathrin light chain OS=Saccharomy...2336e-165     462     100     100GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006897; P:endocytosis; IDA:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
2Q9USP6    229   CLC1_SCHPO Clathrin light chain OS=Schizosacc...2408e-16     77     30     51GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; NAS:PomBase.::GO:0016192; P:vesicle-mediated transport; ISS:PomBase.
3P11716    5037   RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagu...1280.15     37     23     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0033017; C:sarcoplasmic reticulum membrane; ISS:UniProtKB.::GO:0014802; C:terminal cisterna; IDA:BHF-UCL.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005516; F:calmodulin binding; IDA:BHF-UCL.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005219; F:ryanodine-sensitive calcium-release channel activity; IDA:BHF-UCL.::GO:0005245; F:voltage-gated calcium channel activity; ISS:UniProtKB.
GO:0071313; P:cellular response to caffeine; ISS:UniProtKB.::GO:0006936; P:muscle contraction; ISS:UniProtKB.::GO:0043931; P:ossification involved in bone maturation; ISS:UniProtKB.::GO:0003151; P:outflow tract morphogenesis; ISS:UniProtKB.::GO:0014808; P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum; ISS:UniProtKB.::GO:0048741; P:skeletal muscle fiber development; ISS:UniProtKB.::GO:0043588; P:skin development; ISS:UniProtKB.
4Q8MN58    194   CLC_DICDI Clathrin light chain OS=Dictyosteli...770.2     35.4     27     51GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.
GO:0005515; F:protein binding; IPI:dictyBase.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0009992; P:cellular water homeostasis; IMP:dictyBase.::GO:0048268; P:clathrin coat assembly; IMP:dictyBase.::GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0006886; P:intracellular protein transport; ISS:dictyBase.::GO:0006869; P:lipid transport; ISS:dictyBase.::GO:0006898; P:receptor-mediated endocytosis; ISS:dictyBase.
5Q9WAB1    1275   LMBD1_REOVJ Inner capsid protein lambda-1 OS=...1370.34     35.8     25     45GO:0005622; C:intracellular; IEA:InterPro.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.
6O88799    5376   ZAN_MOUSE Zonadhesin OS=Mus musculus (Mouse)....942.2     33.1     23     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
7A2Q848    731   PABP_ASPNC Polyadenylate-binding protein, cyt...942.4     33.1     35     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
8Q42093    1623   AB2C_ARATH ABC transporter C family member 2 ...582.5     33.1     33     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0000325; C:plant-type vacuole; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0008559; F:xenobiotic-transporting ATPase activity; IEA:EC.
9E9PZQ0    5035   RYR1_MOUSE Ryanodine receptor 1 OS=Mus muscul...1133.2     32.7     22     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0030314; C:junctional membrane complex; IDA:MGI.::GO:0005624; C:membrane fraction; IDA:MGI.::GO:0033017; C:sarcoplasmic reticulum membrane; IDA:UniProtKB.::GO:0030315; C:T-tubule; IDA:MGI.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0002020; F:protease binding; IPI:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005219; F:ryanodine-sensitive calcium-release channel activity; IMP:UniProtKB.::GO:0005245; F:voltage-gated calcium channel activity; IDA:UniProtKB.
GO:0071313; P:cellular response to caffeine; IMP:UniProtKB.::GO:0006936; P:muscle contraction; IMP:UniProtKB.::GO:0043931; P:ossification involved in bone maturation; IMP:UniProtKB.::GO:0003151; P:outflow tract morphogenesis; IMP:UniProtKB.::GO:0006937; P:regulation of muscle contraction; TAS:MGI.::GO:0014808; P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum; IMP:UniProtKB.::GO:0048741; P:skeletal muscle fiber development; IMP:UniProtKB.::GO:0043588; P:skin development; IMP:UniProtKB.
10Q9VWA1    219   CLC_DROME Clathrin light chain OS=Drosophila ...2283.4     32     25     42GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.::GO:0008021; C:synaptic vesicle; TAS:FlyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007269; P:neurotransmitter secretion; NAS:FlyBase.::GO:0016183; P:synaptic vesicle coating; TAS:FlyBase.
11Q24UT5    142   RUVX_DESHY Putative Holliday junction resolva...823.4     31.6     30     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
12B8FQB9    142   RUVX_DESHD Putative Holliday junction resolva...823.4     31.6     30     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
13F1LMY4    5035   RYR1_RAT Ryanodine receptor 1 OS=Rattus norve...1133.6     32.7     22     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0033017; C:sarcoplasmic reticulum membrane; IDA:UniProtKB.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005219; F:ryanodine-sensitive calcium-release channel activity; ISS:UniProtKB.::GO:0005245; F:voltage-gated calcium channel activity; ISS:UniProtKB.
GO:0071313; P:cellular response to caffeine; ISS:UniProtKB.::GO:0006936; P:muscle contraction; ISS:UniProtKB.::GO:0043931; P:ossification involved in bone maturation; ISS:UniProtKB.::GO:0003151; P:outflow tract morphogenesis; ISS:UniProtKB.::GO:0014808; P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum; ISS:UniProtKB.::GO:0048741; P:skeletal muscle fiber development; ISS:UniProtKB.::GO:0043588; P:skin development; ISS:UniProtKB.
14P16960    5035   RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa (...1134.4     32.3     22     39GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0033017; C:sarcoplasmic reticulum membrane; ISS:UniProtKB.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005219; F:ryanodine-sensitive calcium-release channel activity; ISS:UniProtKB.::GO:0005245; F:voltage-gated calcium channel activity; ISS:UniProtKB.
GO:0071313; P:cellular response to caffeine; ISS:UniProtKB.::GO:0006936; P:muscle contraction; ISS:UniProtKB.::GO:0043931; P:ossification involved in bone maturation; ISS:UniProtKB.::GO:0003151; P:outflow tract morphogenesis; ISS:UniProtKB.::GO:0014808; P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum; ISS:UniProtKB.::GO:0048741; P:skeletal muscle fiber development; ISS:UniProtKB.::GO:0043588; P:skin development; ISS:UniProtKB.
15P21817    5038   RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapie...1135.8     32     22     39GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0031674; C:I band; IDA:UniProtKB.::GO:0005887; C:integral to plasma membrane; TAS:ProtInc.::GO:0014701; C:junctional sarcoplasmic reticulum membrane; TAS:BHF-UCL.::GO:0005790; C:smooth endoplasmic reticulum; TAS:ProtInc.::GO:0014802; C:terminal cisterna; ISS:BHF-UCL.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005516; F:calmodulin binding; ISS:BHF-UCL.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005219; F:ryanodine-sensitive calcium-release channel activity; ISS:UniProtKB.::GO:0005245; F:voltage-gated calcium channel activity; ISS:UniProtKB.
GO:0071313; P:cellular response to caffeine; ISS:UniProtKB.::GO:0006936; P:muscle contraction; ISS:UniProtKB.::GO:0043931; P:ossification involved in bone maturation; ISS:UniProtKB.::GO:0003151; P:outflow tract morphogenesis; ISS:UniProtKB.::GO:0014808; P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum; ISS:UniProtKB.::GO:0001666; P:response to hypoxia; IDA:BHF-UCL.::GO:0048741; P:skeletal muscle fiber development; ISS:UniProtKB.::GO:0043588; P:skin development; ISS:UniProtKB.
16A2VD01    525   CR3L2_XENLA Cyclic AMP-responsive element-bin...465.9     31.6     30     57GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0002062; P:chondrocyte differentiation; ISS:UniProtKB.::GO:0034976; P:response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0006986; P:response to unfolded protein; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17B2IPA0    185   RRF_STRPS Ribosome-recycling factor OS=Strept...597.8     30.8     42     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006412; P:translation; IEA:UniProtKB-KW.
18Q97R82    185   RRF_STRPN Ribosome-recycling factor OS=Strept...597.8     30.8     42     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006412; P:translation; IEA:UniProtKB-KW.
records
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