Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR161C
Length:
1755
Number of sequences:
5887
Description:
YGR161C-D YGR161C-D SGDID:S000007368, Chr VII from 821709-817747,823015-821711, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53289    263   RTS3_YEAST Protein phosphatase type 2A regula...2630     530     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
2P60852    638   ZP1_HUMAN Zona pellucida sperm-binding protei...920.16     37     28     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0005578; C:proteinaceous extracellular matrix; IEA:UniProtKB-SubCell.
GO:0007338; P:single fertilization; IEA:UniProtKB-KW.
3A2QFL3    495   DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS...1900.33     35.8     24     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
4Q15858    1988   SCN9A_HUMAN Sodium channel protein type 9 sub...801.5     33.9     30     48GO:0001518; C:voltage-gated sodium channel complex; IEA:InterPro.
GO:0005248; F:voltage-gated sodium channel activity; TAS:ProtInc.
5O08562    1984   SCN9A_RAT Sodium channel protein type 9 subun...841.7     33.9     33     51GO:0001518; C:voltage-gated sodium channel complex; IDA:RGD.
GO:0031402; F:sodium ion binding; IDA:RGD.::GO:0005248; F:voltage-gated sodium channel activity; IDA:RGD.
GO:0019228; P:regulation of action potential in neuron; IDA:RGD.::GO:0043179; P:rhythmic excitation; NAS:RGD.
6Q62205    1984   SCN9A_MOUSE Sodium channel protein type 9 sub...841.7     33.9     33     51
GO:0048266; P:behavioral response to pain; IMP:MGI.::GO:0006954; P:inflammatory response; IMP:MGI.::GO:0009791; P:post-embryonic development; IMP:MGI.::GO:0009636; P:response to toxin; IDA:MGI.
7A3PCP0    106   URE2_PROM0 Urease subunit beta OS=Prochloroco...662.9     31.2     32     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0009039; F:urease activity; IEA:EC.
8A2BQW7    106   URE2_PROMS Urease subunit beta OS=Prochloroco...683.7     30.8     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0009039; F:urease activity; IEA:EC.
9Q16204    474   CCDC6_HUMAN Coiled-coil domain-containing pro...486.8     31.6     40     65GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0017124; F:SH3 domain binding; IEA:UniProtKB-KW.::GO:0005200; F:structural constituent of cytoskeleton; TAS:ProtInc.
10D3YZP9    469   CCDC6_MOUSE Coiled-coil domain-containing pro...487.5     31.6     40     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0017124; F:SH3 domain binding; IEA:UniProtKB-KW.
11B1J5W6    101   CBPM_PSEPW Chaperone modulatory protein CbpM ...319.7     29.6     45     71
records
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