| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
721 | O88477 | 577 | IF2B1_MOUSE Insulin-like growth factor 2 mRNA... | 175 | 0.6 | 36.2 | 23 | 43 | GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0010610; P:regulation of mRNA stability involved in response to stress; ISS:UniProtKB. | 722 | Q9DF42 | 174 | RB8AA_XENLA RNA-binding protein 8A-A OS=Xenop... | 79 | 0.71 | 34.7 | 24 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 723 | Q02427 | 144 | RBP1_DROME RNA-binding protein 1 OS=Drosophil... | 62 | 0.73 | 34.3 | 34 | 55 | GO:0005634; C:nucleus; IDA:FlyBase.::GO:0035327; C:transcriptionally active chromatin; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006376; P:mRNA splice site selection; ISS:FlyBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IDA:FlyBase. | 724 | Q18409 | 179 | RSP6_CAEEL Probable splicing factor, arginine... | 76 | 0.83 | 34.7 | 26 | 53 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0008406; P:gonad development; IGI:UniProtKB.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040026; P:positive regulation of vulval development; IMP:WormBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:WormBase.::GO:0031554; P:regulation of transcription termination, DNA-dependent; IGI:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB. | 725 | Q28BZ1 | 174 | RBM8A_XENTR RNA-binding protein 8A OS=Xenopus... | 79 | 0.85 | 34.7 | 23 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 726 | P26686 | 376 | SRR55_DROME Serine-arginine protein 55 OS=Dro... | 198 | 0.95 | 35.4 | 21 | 40 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0016607; C:nuclear speck; IDA:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0035327; C:transcriptionally active chromatin; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007067; P:mitosis; IMP:FlyBase.::GO:0006376; P:mRNA splice site selection; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 727 | Q5U241 | 1464 | PD5BB_XENLA Sister chromatid cohesion protein... | 111 | 0.95 | 35.8 | 31 | 48 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007064; P:mitotic sister chromatid cohesion; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB. | 728 | P97855 | 465 | G3BP1_MOUSE Ras GTPase-activating protein-bin... | 75 | 0.96 | 35.4 | 31 | 45 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006810; P:transport; IEA:UniProtKB-KW. | 729 | Q9NEW6 | 258 | RSP3_CAEEL Probable splicing factor, arginine... | 75 | 1.1 | 34.7 | 27 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:UniProtKB.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB. | 730 | O01761 | 8081 | UNC89_CAEEL Muscle M-line assembly protein un... | 141 | 8.9 | 32.7 | 30 | 48 | GO:0005887; C:integral to plasma membrane; IEA:InterPro.::GO:0031430; C:M band; IDA:WormBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:InterPro.::GO:0019902; F:phosphatase binding; IPI:WormBase.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0017048; F:Rho GTPase binding; IPI:WormBase.::GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IDA:WormBase.::GO:0005021; F:vascular endothelial growth factor-activated receptor activity; IEA:InterPro. | | | | | | | | | | GO:0040011; P:locomotion; IMP:WormBase.::GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.::GO:0030241; P:skeletal muscle myosin thick filament assembly; IMP:WormBase.::GO:0048010; P:vascular endothelial growth factor receptor signaling pathway; IEA:InterPro. | 731 | Q4VA53 | 1446 | PDS5B_MOUSE Sister chromatid cohesion protein... | 161 | 1.3 | 35 | 26 | 47 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007064; P:mitotic sister chromatid cohesion; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB. | 732 | P14922 | 966 | CYC8_YEAST General transcriptional corepresso... | 107 | 1.4 | 35 | 30 | 56 | GO:0017053; C:transcriptional repressor complex; IDA:SGD. | | | | | | | | | | GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; IDA:SGD. | | | | | | | | | | GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD. | 733 | Q9W4E2 | 3578 | NBEA_DROME Neurobeachin OS=Drosophila melanog... | 154 | 1.5 | 35 | 25 | 45 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016021; C:integral to membrane; IDA:UniProtKB. | | | | | | | | | | GO:0051018; F:protein kinase A binding; IDA:UniProtKB. | | | | | | | | | | GO:0042675; P:compound eye cone cell differentiation; IMP:FlyBase.::GO:0042462; P:eye photoreceptor cell development; IMP:UniProtKB. | 734 | P10080 | 294 | SSBP1_YEAST Single-stranded nucleic acid-bind... | 91 | 1.8 | 34.3 | 30 | 47 | GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:SGD. | | | | | | | | | | GO:0032055; P:negative regulation of translation in response to stress; IMP:SGD. | 735 | Q90WJ3 | 1256 | PAXI1_XENLA PAX-interacting protein 1 OS=Xeno... | 60 | 2.5 | 34.3 | 33 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 736 | A5DNX9 | 274 | EIF3G_PICGU Eukaryotic translation initiation... | 65 | 5.9 | 32.3 | 28 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 737 | Q9NR30 | 783 | DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo ... | 64 | 3.3 | 33.9 | 41 | 56 | GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:ProtInc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 738 | P38931 | 1420 | SSN2_YEAST Mediator of RNA polymerase II tran... | 104 | 3.8 | 33.9 | 24 | 54 | GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:SGD. | | | | | | | | | | GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:SGD.::GO:0001135; F:RNA polymerase II transcription factor recruiting transcription factor activity; IMP:SGD. | | | | | | | | | | GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000435; P:positive regulation of transcription from RNA polymerase II promoter by galactose; IMP:SGD. | 739 | P53927 | 220 | NOP15_YEAST Ribosome biogenesis protein 15 OS... | 109 | 3.9 | 32.7 | 26 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000915; P:cytokinesis, actomyosin contractile ring assembly; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IPI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 740 | O81126 | 200 | RZP22_ARATH Serine/arginine-rich splicing fac... | 63 | 7.5 | 32 | 27 | 49 | GO:0016607; C:nuclear speck; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:TAIR. | 741 | Q9SJA6 | 196 | RZ22A_ARATH Serine/arginine-rich splicing fac... | 63 | 4.6 | 32.3 | 32 | 49 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008380; P:RNA splicing; NAS:TAIR. | 742 | Q9JIK5 | 851 | DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus m... | 77 | 4.8 | 33.1 | 38 | 53 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI. | | | | | | | | | | GO:0043330; P:response to exogenous dsRNA; IMP:MGI.::GO:0009615; P:response to virus; IMP:MGI. | 743 | Q28009 | 513 | FUS_BOVIN RNA-binding protein FUS OS=Bos taur... | 87 | 5.2 | 33.1 | 30 | 46 | GO:0005737; C:cytoplasm; ISS:AgBase.::GO:0005634; C:nucleus; ISS:AgBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:AgBase. | 744 | P56959 | 518 | FUS_MOUSE RNA-binding protein FUS OS=Mus musc... | 87 | 5.3 | 33.1 | 30 | 46 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 745 | Q5HKP6 | 688 | LIP_STAEQ Lipase OS=Staphylococcus epidermidi... | 159 | 5.6 | 33.1 | 23 | 49 | GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro. | | | | | | | | | | GO:0050253; F:retinyl-palmitate esterase activity; IEA:EC.::GO:0004806; F:triglyceride lipase activity; IEA:EC. | | | | | | | | | | GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW. | 746 | P35637 | 526 | FUS_HUMAN RNA-binding protein FUS OS=Homo sap... | 87 | 6.7 | 32.7 | 30 | 46 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome. | 747 | P50493 | 1153 | PVDB_PLAKN Duffy receptor beta form OS=Plasmo... | 71 | 6.9 | 32.7 | 32 | 61 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0004872; F:receptor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009405; P:pathogenesis; IEA:InterPro. | 748 | Q9NWH9 | 1034 | SLTM_HUMAN SAFB-like transcription modulator ... | 61 | 8.1 | 32.7 | 25 | 51 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 749 | O42254 | 576 | IF2B1_CHICK Insulin-like growth factor 2 mRNA... | 135 | 8.1 | 32.3 | 23 | 46 | GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 750 | Q5F3U9 | 1412 | PDS5B_CHICK Sister chromatid cohesion protein... | 150 | 8.7 | 32.3 | 26 | 44 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007064; P:mitotic sister chromatid cohesion; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB. | 751 | Q3B8Q1 | 782 | DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus ... | 77 | 9.7 | 32.3 | 38 | 55 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | |
