Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR159C
Length:
414
Number of sequences:
5887
Description:
YGR159C NSR1 SGDID:S000003391, Chr VII from 807656-806412, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q6CWX1    269   EIF3G_KLULA Eukaryotic translation initiation...960.03     39.7     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
632Q1LZD9    520   PSPC1_BOVIN Paraspeckle component 1 OS=Bos ta...760.052     39.3     30     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
633Q0U6E7    281   EIF3G_PHANO Eukaryotic translation initiation...649.3     32     28     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
634Q5ZLP8    584   IF2B3_CHICK Insulin-like growth factor 2 mRNA...1650.005     42.7     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
635Q62826    690   HNRPM_RAT Heterogeneous nuclear ribonucleopro...750.037     40     32     53GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003823; F:antigen binding; IMP:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; TAS:RGD.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
636O00425    579   IF2B3_HUMAN Insulin-like growth factor 2 mRNA...1350.005     42.7     27     50GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0048027; F:mRNA 5'-UTR binding; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0045182; F:translation regulator activity; ISS:BHF-UCL.
GO:0009653; P:anatomical structure morphogenesis; TAS:ProtInc.::GO:0017148; P:negative regulation of translation; ISS:BHF-UCL.::GO:0042035; P:regulation of cytokine biosynthetic process; IC:BHF-UCL.::GO:0006412; P:translation; TAS:ProtInc.
637Q9NQ94    594   A1CF_HUMAN APOBEC1 complementation factor OS=...1580.083     38.9     27     46GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB.
GO:0016554; P:cytidine to uridine editing; TAS:Reactome.::GO:0016556; P:mRNA modification; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; IDA:UniProtKB.
638Q6NV83    1029   SR140_MOUSE U2 snRNP-associated SURP motif-co...750.006     42.7     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
639O15042    1029   SR140_HUMAN U2 snRNP-associated SURP motif-co...750.006     42.7     33     57GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
640Q5AHI7    454   NOP12_CANAL Nucleolar protein 12 OS=Candida a...2820.006     42.4     23     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
641Q8WUA2    492   PPIL4_HUMAN Peptidyl-prolyl cis-trans isomera...900.15     38.1     27     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006457; P:protein folding; IEA:UniProtKB-KW.
642Q7SXN4    635   CPEB4_DANRE Cytoplasmic polyadenylation eleme...2030.007     42.4     27     39
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
643Q5R7X2    1028   SR140_PONAB U2 snRNP-associated SURP motif-co...750.007     42.4     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
644Q9UT83    609   MUG28_SCHPO Meiotically up-regulated gene 28 ...640.007     42.4     38     61GO:0005619; C:ascospore wall; IDA:PomBase.::GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005628; C:prospore membrane; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031321; P:ascospore-type prospore assembly; IMP:PomBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.
645O13829    261   RU17_SCHPO U1 small nuclear ribonucleoprotein...780.063     38.5     27     49GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030619; F:U1 snRNA binding; ISS:PomBase.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase.
646P0CN52    290   EIF3G_CRYNJ Eukaryotic translation initiation...891.6     34.3     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
647P0CN53    290   EIF3G_CRYNB Eukaryotic translation initiation...891.6     34.3     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
648Q8T5T1    4835   MDN1_GIAIN Midasin OS=Giardia intestinalis (G...1673.3     33.9     17     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006461; P:protein complex assembly; IEA:InterPro.
649Q9CXG3    492   PPIL4_MOUSE Peptidyl-prolyl cis-trans isomera...890.28     37     25     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006457; P:protein folding; IEA:UniProtKB-KW.
650Q95ZE9    281   NELFE_DROVI Negative elongation factor E OS=D...1390.01     41.2     27     45GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0017053; C:transcriptional repressor complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
651Q8CPQ1    1335   ATL_STAES Bifunctional autolysin OS=Staphyloc...1351.4     35     16     53GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0004040; F:amidase activity; IEA:InterPro.::GO:0033925; F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; IEA:EC.::GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:EC.
GO:0010382; P:cellular cell wall macromolecule metabolic process; IEA:InterPro.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
652P38996    802   NAB3_YEAST Nuclear polyadenylated RNA-binding...950.012     41.6     27     48GO:0035649; C:Nrd1 complex; IDA:SGD.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0001068; F:transcription regulatory region RNA binding; IDA:SGD.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IPI:SGD.::GO:0030847; P:termination of RNA polymerase II transcription, exosome-dependent; IMP:SGD.
653Q5HQB9    1335   ATL_STAEQ Bifunctional autolysin OS=Staphyloc...1351.6     35     16     53GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0004040; F:amidase activity; IEA:InterPro.::GO:0033925; F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; IEA:EC.::GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:EC.
GO:0010382; P:cellular cell wall macromolecule metabolic process; IEA:InterPro.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
654O33635    1335   ATL_STAEP Bifunctional autolysin OS=Staphyloc...1351.6     35     16     53GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0004040; F:amidase activity; IEA:InterPro.::GO:0033925; F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; IEA:EC.::GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:EC.
GO:0010382; P:cellular cell wall macromolecule metabolic process; IEA:InterPro.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
655Q23121    312   RSP1_CAEEL Probable splicing factor, arginine...770.22     37     27     48GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040026; P:positive regulation of vulval development; IMP:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; IGI:UniProtKB.
656Q9NTI5    1447   PDS5B_HUMAN Sister chromatid cohesion protein...1620.015     41.6     27     48GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; TAS:ProtInc.::GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0007064; P:mitotic sister chromatid cohesion; IMP:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.
657Q5R9L3    482   G3BP2_PONAB Ras GTPase-activating protein-bin...770.016     41.2     32     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
658Q9UN86    482   G3BP2_HUMAN Ras GTPase-activating protein-bin...770.016     41.2     32     49GO:0005829; C:cytosol; TAS:Reactome.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030159; F:receptor signaling complex scaffold activity; NAS:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0007253; P:cytoplasmic sequestering of NF-kappaB; NAS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0007265; P:Ras protein signal transduction; NAS:UniProtKB.::GO:0051056; P:regulation of small GTPase mediated signal transduction; TAS:Reactome.
659A7SKE9    294   EIF3G_NEMVE Eukaryotic translation initiation...780.017     40.4     28     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
660P97379    482   G3BP2_MOUSE Ras GTPase-activating protein-bin...770.018     40.8     32     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
661Q54ZS8    222   PABP2_DICDI Polyadenylate-binding protein 2 O...750.022     39.7     29     51GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.
records
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